Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.13445	Oxct1	3-oxoacid CoA transferase 1	15		67041
Gene Ontology	3-oxoacid CoA-transferase activity | CoA-transferase activity | extracellular space | metabolism | mitochondrion | mitochondrion | succinyl-CoA metabolism | transferase activity
Human Homolog	OXCT1[3-oxoacid CoA transferase 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 67 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATGCTAAAA AGTGCTAAGA ATATTTTTTA ATATTTTTTT (2) CCAATGCAGC GCACTCTTAG 30.9 0.0309 Cb medulloblastoma ATATTTTTTA CCAATGCAGC GCACTCTTAG 13.8 0.0138 P8 GC+1d culture AGTGCTAAGA ATATTTTTTA CCAATGCAGC GCACTCTTAG TTGTGAAGGG 17 0.017 P8 GC+SHH+1d culture AGTCCTGAAT AGTGCTAAGA ATATTTTTTA ATATTTTTTT (2) CCAATGCAGC GCACTCTTAG TGCAAGCTAA 19.9 0.0199 3T3 fibroblasts CCAATGCAGC TGCATTTGTG 21 0.021 E15 cortex CCAATGCAGC 4.9 0.0049 P1 cortex ATATTTTTTA CCAATGCAGC 13.6 0.0136 Hypothalamus AGTGCTAAGA ATATTTTTTA GCACTCTTAG TTGTGAAGGG 12.6 0.0126 E12.5 retina AATGCTAAAA AGTGCTAAGA CCAATGCAGC 7.6 0.0076 E14.5 retina ATATTTTTTA CCAATGCAGC GCACTCTTAG TGCATTTGTG TTGTGAAGGG 25.5 0.0255 E16.5 retina AGTGCTAAGA ATATTTTTTA CCAATGCAGC TGCATTTGTG 16.3 0.0163 E18.5 retina AATGCTAAAA AGTGCTAAGA ATATTTTTTA 7.2 0.0072 P0.5 retina CCAATGCAGC GCACTCTTAG 4 0.004 P2.5 retina AATGCTAAAA AGTGCTAAGA ATATTTTTTA CCAATGCAGC TGCATTTGTG 10.7 0.0107 P4.5 retina AGTCCTGAAT ATATTTTTTA CCAATGCAGC TGCAAGCTAA 15.9 0.0159 P6.5 retina AATGCTAAAA AGTGCTAAGA ATATTTTTTA CCAATGCAGC GCACTCTTAG 18.5 0.0185 P10.5 crx- retina AATGCTAAAA ATATTTTTTA CCAATGCAGC 9.3 0.0093 P10.5 crx+ retina CCAATGCAGC 1.9 0.0019 Adult retinal CCAATGCAGC 1.9 0.0019 ONL ATATTTTTTA 7.7 0.0077