Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.134516	Otx2	orthodenticle homolog 2 (Drosophila)	14	14 (14 19.0 cM)	18424
Gene Ontology	anterior/posterior pattern formation | cell fate commitment | central nervous system development | development | DNA binding | dorsal/ventral pattern formation | eye photoreceptor cell fate commitment | forebrain development | forebrain development | midbrain development | midbrain development | nucleus | organogenesis | protein binding | regulation of transcription from Pol II promoter | regulation of transcription, DNA-dependent | transcription factor activity | transcription regulator activity
Human Homolog	OTX2[orthodenticle homolog 2 (Drosophila)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 5 In Situ Hybridization Images

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SAGE Tags

Total 36 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACCAACAGGT GACTGTGGAT 6.5 0.0065 Cb medulloblastoma ACCAACAGGT 2.3 0.0023 P8 GC+1d culture ACCAACAGGT GCCTTCAAAG 5.7 0.0057 P8 GC+SHH+1d culture ACCAACAGGT 4.7 0.0047 Hypothalamus GAAATTCCAG 1.8 0.0018 E12.5 retina ACCAACAGGT 5.6 0.0056 E14.5 retina ACCAACAGGT 12.8 0.0128 E16.5 retina ACCAACAGGT CAACCAAATA GCCTTCAAAG 41.6 0.0416 E18.5 retina ACCAACAGGT GACTGTGGAT 14.5 0.0145 P0.5 retina ACCAACAGGT 19.6 0.0196 P2.5 retina ACCAACAGGT CAACCAAATA GACTGTGGAT 31.7 0.0317 P4.5 retina ACCAACAGGT CAACCAAATA GAAATTCCAG GCCTTCAAAG 69.3 0.0693 P6.5 retina ACCAACAGGT CAACCAAATA GAAATTCCAG GCCTTCAAAG 65 0.065 P10.5 crx- retina ACCAACAGGT GCCTTCAAAG 53.9 0.0539 P10.5 crx+ retina ACCAACAGGT AGGGAAGAGG (2) CAACCAAATA 21.1 0.0211 Adult retinal ACCAACAGGT AGGGAAGAGG (2) GCCTTCAAAG 16.8 0.0168 ONL ACCAACAGGT AGGGAAGAGG (2) 11.5 0.0115