| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ATTCCCATTT (7) ATTCTGTTTG (5) TTCGCTGCCA (7)
| 13.1 | 0.0131 |
| Cb medulloblastoma | ATTCCCATTT (7) ATTCTGTTTG (5) TTCGCTGCCA (7)
| 16.2 | 0.0162 |
| P8 GC+1d culture | ATTCCCATTT (7) ATTCTGTTTG (5) TTCGCTGCCA (7)
| 4.5 | 0.0045 |
| P8 GC+SHH+1d culture | ATTCTGTTTG (5) TAGCTGTCTT (5) TTCGCTGCCA (7)
| 12.9 | 0.0129 |
| 3T3 fibroblasts | ATTCCCATTT (7)
| 3.5 | 0.0035 |
| E15 cortex | ATTCTGTTTG (5) TAGCTGTCTT (5)
| 19.7 | 0.0197 |
| P1 cortex | ATTCTGTTTG (5)
| 4.5 | 0.0045 |
| Hypothalamus | GGAGAGATAA (5) TTCGCTGCCA (7)
| 7.2 | 0.0072 |
| E12.5 retina | ATTCTGTTTG (5) GGAGAGATAA (5) TTCGCTGCCA (7)
| 15.1 | 0.0151 |
| E14.5 retina | ATTCCCATTT (7) ATTCTGTTTG (5) TAGCTGTCTT (5) TTCGCTGCCA (7)
| 16.3 | 0.0163 |
| E16.5 retina | ATTCTGTTTG (5) TTCGCTGCCA (7)
| 16.3 | 0.0163 |
| E18.5 retina | ATTCTGTTTG (5)
| 9.1 | 0.0091 |
| P0.5 retina | ATTCTGTTTG (5) TTCGCTGCCA (7)
| 15.7 | 0.0157 |
| P2.5 retina | ATTCTGTTTG (5) GGAGAGATAA (5) TTCGCTGCCA (7)
| 15.8 | 0.0158 |
| P4.5 retina | ATTCTGTTTG (5) TTCGCTGCCA (7)
| 19.8 | 0.0198 |
| P6.5 retina | ATTCTGTTTG (5) GGAGAGATAA (5) TTCGCTGCCA (7)
| 15 | 0.015 |
| P10.5 crx- retina | ATTCTGTTTG (5) TTCGCTGCCA (7)
| 22.3 | 0.0223 |
| P10.5 crx+ retina | ATTCTGTTTG (5) TTCGCTGCCA (7)
| 5.7 | 0.0057 |
| Adult retinal | ATTCTGTTTG (5)
| 5.6 | 0.0056 |
| ONL | ATTCCCATTT (7) ATTCTGTTTG (5)
| 13.4 | 0.0134 |