Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.13694	8030488J09Rik	RIKEN cDNA 8030488J09 gene	7		77504
Mm.13694	Oat	ornithine aminotransferase	7	7 63.0 cM	18242
Gene Ontology	mitochondrion | ornithine-oxo-acid transaminase activity | pyridoxal phosphate binding | transaminase activity | transferase activity
Human Homolog	OAT[ornithine aminotransferase (gyrate atrophy)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 109 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTTGCTGG (369) 68.5 0.0685 P8 Cb GC GTGAGCCCAT (4) 9.8 0.0098 P8 Cb GC GAGAATGGCA (10) 8.2 0.0082 P8 Cb GC GGATCATTCT (6) 8.2 0.0082 P8 Cb GC AGAATGTCAG (4) 1.6 0.0016 P8 Cb GC CCCGGCTTTT (3) 1.6 0.0016 Cb medulloblastoma TGGTTGCTGG (369) 113.3 0.1133 Cb medulloblastoma GAGAATGGCA (10) 23.1 0.0231 Cb medulloblastoma AAGCTGCCCT (3) 4.6 0.0046 Cb medulloblastoma GGATCATTCT (6) 4.6 0.0046 Cb medulloblastoma AGAATGTCAG (4) 2.3 0.0023 Cb medulloblastoma GTGAGCCCAT (4) 2.3 0.0023 P8 GC+1d culture TGGTTGCTGG (369) 57.1 0.0571 P8 GC+1d culture GAGAATGGCA (10) 5.7 0.0057 P8 GC+1d culture AAGCTGCCCT (3) 3.4 0.0034 P8 GC+1d culture AGAATGTCAG (4) 1.1 0.0011 P8 GC+1d culture GTGAGCCCAT (4) 1.1 0.0011 P8 GC+SHH+1d culture TGGTTGCTGG (369) 89 0.089 P8 GC+SHH+1d culture AGAATGTCAG (4) 2.3 0.0023 P8 GC+SHH+1d culture GGATCATTCT (6) 2.3 0.0023 P8 GC+SHH+1d culture GTGAGCCCAT (4) 2.3 0.0023 P8 GC+SHH+1d culture AAGCTGCCCT (3) 1.2 0.0012 P8 GC+SHH+1d culture GAGAATGGCA (10) 1.2 0.0012 P8 GC+SHH+1d culture TATTTTCAGT (4) 1.2 0.0012 3T3 fibroblasts TGGTTGCTGG (369) 220.8 0.2208 3T3 fibroblasts GTGAGCCCAT (4) 70.1 0.0701 3T3 fibroblasts AAGCTGCCCT (3) 35 0.035 3T3 fibroblasts GGATCATTCT (6) 3.5 0.0035 E15 cortex TGGTTGCTGG (369) 277.1 0.2771 E15 cortex GTGAGCCCAT (4) 123.7 0.1237 E15 cortex AGAATGTCAG (4) 4.9 0.0049 P1 cortex TGGTTGCTGG (369) 86.4 0.0864 P1 cortex GTGAGCCCAT (4) 27.3 0.0273 P1 cortex GTTGCTGTGA (2) 13.6 0.0136 P1 cortex GGATCATTCT (6) 9.1 0.0091 P1 cortex AAGCTGCCCT (3) 4.5 0.0045 Hypothalamus TGGTTGCTGG (369) 349.6 0.3496 Hypothalamus GAGAATGGCA (10) 18.1 0.0181 Hypothalamus AAGCTGCCCT (3) 3.6 0.0036 Hypothalamus AGAATGTCAG (4) 1.8 0.0018 Hypothalamus CCCGGCTTTT (3) 1.8 0.0018 Hypothalamus GGATCATTCT (6) 1.8 0.0018 Hypothalamus GTGAGCCCAT (4) 1.8 0.0018 Hypothalamus TATTTTCAGT (4) 1.8 0.0018 E12.5 retina TGGTTGCTGG (369) 157.7 0.1577 E12.5 retina GGATCATTCT (6) 3.8 0.0038 E12.5 retina GTGAGCCCAT (4) 3.8 0.0038 E12.5 retina GAGAATGGCA (10) 1.9 0.0019 E12.5 retina GTGGAAGCCC (6) 1.9 0.0019 E14.5 retina TGGTTGCTGG (369) 936.5 0.9365 E14.5 retina GAGAATGGCA (10) 3.6 0.0036 E14.5 retina GGATCATTCT (6) 3.6 0.0036 E14.5 retina AGAATGTCAG (4) 1.8 0.0018 E14.5 retina GTGAGCCCAT (4) 1.8 0.0018 E14.5 retina GTGGAAGCCC (6) 1.8 0.0018 E16.5 retina TGGTTGCTGG (369) 767.9 0.7679 E16.5 retina GAGAATGGCA (10) 5.4 0.0054 E16.5 retina GTGAGCCCAT (4) 5.4 0.0054 E16.5 retina AAGCTGCCCT (3) 3.6 0.0036 E16.5 retina AGAATGTCAG (4) 1.8 0.0018 E18.5 retina TGGTTGCTGG (369) 252.8 0.2528 E18.5 retina GAGAATGGCA (10) 14.6 0.0146 E18.5 retina AAGCTGCCCT (3) 1.8 0.0018 E18.5 retina GGATCATTCT (6) 1.8 0.0018 E18.5 retina GTGAGCCCAT (4) 1.8 0.0018 E18.5 retina GTTGCTGTGA (2) 1.8 0.0018 E18.5 retina TATTTTCAGT (4) 1.8 0.0018 P0.5 retina TGGTTGCTGG (369) 190.4 0.1904 P0.5 retina GAGAATGGCA (10) 9.8 0.0098 P0.5 retina AGAATGTCAG (4) 3.9 0.0039 P0.5 retina GTGGAAGCCC (6) 3.9 0.0039 P0.5 retina GCCAAGGGTT (4) 2 0.002 P0.5 retina GTGAGCCCAT (4) 2 0.002 P0.5 retina TATTTTCAGT (4) 2 0.002 P2.5 retina TGGTTGCTGG (369) 165.4 0.1654 P2.5 retina GAGAATGGCA (10) 10.6 0.0106 P2.5 retina AGAATGTCAG (4) 5.3 0.0053 P2.5 retina GTGAGCCCAT (4) 3.5 0.0035 P2.5 retina TATTTTCAGT (4) 1.8 0.0018 P4.5 retina TGGTTGCTGG (369) 150.6 0.1506 P4.5 retina GAGAATGGCA (10) 13.9 0.0139 P4.5 retina TATTTTCAGT (4) 4 0.004 P4.5 retina GTGAGCCCAT (4) 2 0.002 P6.5 retina TGGTTGCTGG (369) 156.7 0.1567 P6.5 retina GAGAATGGCA (10) 10 0.01 P6.5 retina AGAATGTCAG (4) 3.3 0.0033 P6.5 retina GGATCATTCT (6) 3.3 0.0033 P6.5 retina AAGCTGCCCT (3) 1.7 0.0017 P6.5 retina GTGAGCCCAT (4) 1.7 0.0017 P10.5 crx- retina TGGTTGCTGG (369) 280.5 0.2805 P10.5 crx- retina AGAATGTCAG (4) 7.4 0.0074 P10.5 crx- retina AAGCTGCCCT (3) 1.9 0.0019 P10.5 crx- retina GAGAATGGCA (10) 1.9 0.0019 P10.5 crx+ retina TGGTTGCTGG (369) 101.9 0.1019 P10.5 crx+ retina AAGCTGCCCT (3) 5.8 0.0058 P10.5 crx+ retina GAGAATGGCA (10) 3.8 0.0038 P10.5 crx+ retina GTGAGCCCAT (4) 3.8 0.0038 P10.5 crx+ retina AGAATGTCAG (4) 1.9 0.0019 P10.5 crx+ retina CCCGGCTTTT (3) 1.9 0.0019 Adult retinal TGGTTGCTGG (369) 214.8 0.2148 Adult retinal AAGCTGCCCT (3) 9.3 0.0093 Adult retinal GAGAATGGCA (10) 9.3 0.0093 Adult retinal AGAATGTCAG (4) 3.7 0.0037 Adult retinal TATTTTCAGT (4) 3.7 0.0037 Adult retinal GTGAGCCCAT (4) 1.9 0.0019 ONL TGGTTGCTGG (369) 398.4 0.3984 ONL GAGAATGGCA (10) 5.7 0.0057 ONL GCCAAGGGTT (4) 3.8 0.0038 ONL AAGCTGCCCT (3) 1.9 0.0019