Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1372	Pde6b	phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide	5	5 57.0 cM	18587
Gene Ontology	3',5'-cyclic-nucleotide phosphodiesterase activity | catalytic activity | hydrolase activity | membrane | perception of light | receptor activity | signal transduction | vision
Human Homolog	PDE6B[phosphodiesterase 6B, cGMP-specific, rod, beta (congenital stationary night blindness 3, autosomal dominant)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 60 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGATGTTTC GAACATTGCA (2) GACCCAAGGA (2) 9.7 0.0097 Cb medulloblastoma ACAGGGAAAA GAACATTGCA (2) TGAGATGTGA 11.5 0.0115 P8 GC+1d culture GAACATTGCA (2) 10.3 0.0103 P8 GC+SHH+1d culture ACAGGGAAAA GAACATTGCA (2) GACCCAAGGA (2) 4.7 0.0047 3T3 fibroblasts AAGATGTTTC GAACATTGCA (2) 220.8 0.2208 P1 cortex GAACATTGCA (2) 18.2 0.0182 Hypothalamus ACAGTGTTGG (3) GAACATTGCA (2) GACCCAAGGA (2) TTGAGGATGT 21.7 0.0217 E12.5 retina GAACATTGCA (2) 3.8 0.0038 E14.5 retina ACAGGGAAAA CTCCACCACC GAACATTGCA (2) TGAGATGTGA 9 0.009 E16.5 retina ACAGGGAAAA ACAGTGTTGG (3) GAACATTGCA (2) 7.2 0.0072 E18.5 retina ACAGTGTTGG (3) 1.8 0.0018 P0.5 retina GAACATTGCA (2) 3.9 0.0039 P2.5 retina AAACACGGCT ACAGGGAAAA GAACATTGCA (2) TTGAGGATGT 7.2 0.0072 P4.5 retina AGCAGCTCCT GAACATTGCA (2) GACCCAAGGA (2) GCTTTGGGTC 25.8 0.0258 P6.5 retina AAACACGGCT AGCAGCTCCT CTCCACCACC GAACATTGCA (2) GCTTTGGGTC TTTGACCGAC 65.1 0.0651 P10.5 crx- retina AGCAGCTCCT GAACATTGCA (2) GCTTTGGGTC TTTGACCGAC 74.3 0.0743 P10.5 crx+ retina AAGATGTTTC AGCAGCTCCT GAACATTGCA (2) GCTTTGGGTC TTTGACCGAC 151.8 0.1518 Adult retinal AGCAGCTCCT GAACATTGCA (2) GCTTTGGGTC TGAGATGTGA 203.8 0.2038 ONL AAACACGGCT AAGATGTTTC AGCAGCTCCT GAACATTGCA (2) GCTTTGGGTC TTTGACCGAC 201 0.201