Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.138073	C130068N17Rik	RIKEN cDNA C130068N17 gene	2		277396
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 95 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC TGAGCCAACT (2) 6.5 0.0065 P8 Cb GC CAAAAGAAGG (7) 1.6 0.0016 P8 Cb GC CGAAAGGTAA 1.6 0.0016 P8 Cb GC GATTTTTCTG (11) 1.6 0.0016 P8 Cb GC TACACACACA (29) 1.6 0.0016 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma TGTTTTTTTT (9) 4.6 0.0046 Cb medulloblastoma CAAAAGAAGG (7) 2.3 0.0023 Cb medulloblastoma GATTTTTCTG (11) 2.3 0.0023 Cb medulloblastoma TACACACACA (29) 2.3 0.0023 Cb medulloblastoma TGAGCCAACT (2) 2.3 0.0023 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture CGAAAGGTAA 3.4 0.0034 P8 GC+1d culture GATTTTTCTG (11) 3.4 0.0034 P8 GC+1d culture TGAGCCAACT (2) 1.1 0.0011 P8 GC+1d culture TGTTTTTTTT (9) 1.1 0.0011 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture CAAAAGAAGG (7) 4.7 0.0047 P8 GC+SHH+1d culture TGAGCCAACT (2) 4.7 0.0047 P8 GC+SHH+1d culture CGAAAGGTAA 2.3 0.0023 P8 GC+SHH+1d culture TACGGTGACT 1.2 0.0012 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 E15 cortex CCTTTAATCC (355) 54.4 0.0544 E15 cortex TGAGCCAACT (2) 9.9 0.0099 P1 cortex CCTTTAATCC (355) 154.5 0.1545 P1 cortex TGAGCCAACT (2) 4.5 0.0045 P1 cortex TGTTTTTTTT (9) 4.5 0.0045 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus TACACACACA (29) 7.2 0.0072 Hypothalamus CAAAAGAAGG (7) 1.8 0.0018 Hypothalamus CGAAAGGTAA 1.8 0.0018 Hypothalamus GATTTTTCTG (11) 1.8 0.0018 Hypothalamus TGAGCCAACT (2) 1.8 0.0018 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina TACACACACA (29) 1.9 0.0019 E12.5 retina TACGGTGACT 1.9 0.0019 E12.5 retina TGAGCCAACT (2) 1.9 0.0019 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina TACACACACA (29) 5.5 0.0055 E14.5 retina TGTTTTTTTT (9) 5.5 0.0055 E14.5 retina CAAAAGAAGG (7) 1.8 0.0018 E14.5 retina CGAAAGGTAA 1.8 0.0018 E14.5 retina GATTTTTCTG (11) 1.8 0.0018 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina TACACACACA (29) 3.6 0.0036 E16.5 retina TGAGCCAACT (2) 3.6 0.0036 E16.5 retina GATTTTTCTG (11) 1.8 0.0018 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina CGAAAGGTAA 5.5 0.0055 E18.5 retina TGAGCCAACT (2) 3.6 0.0036 E18.5 retina CAAAAGAAGG (7) 1.8 0.0018 E18.5 retina TACACACACA (29) 1.8 0.0018 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina TACACACACA (29) 5.9 0.0059 P0.5 retina TGAGCCAACT (2) 3.9 0.0039 P0.5 retina CGAAAGGTAA 2 0.002 P0.5 retina GATTTTTCTG (11) 2 0.002 P0.5 retina TGTTTTTTTT (9) 2 0.002 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina TGAGCCAACT (2) 7 0.007 P2.5 retina CGAAAGGTAA 1.8 0.0018 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina TGAGCCAACT (2) 5.9 0.0059 P4.5 retina TACACACACA (29) 4 0.004 P4.5 retina CAAAAGAAGG (7) 2 0.002 P4.5 retina TACGGTGACT 2 0.002 P4.5 retina TGTTTTTTTT (9) 2 0.002 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina CGAAAGGTAA 3.3 0.0033 P6.5 retina TACACACACA (29) 3.3 0.0033 P6.5 retina CAAAAGAAGG (7) 1.7 0.0017 P6.5 retina TACGGTGACT 1.7 0.0017 P6.5 retina TGAGCCAACT (2) 1.7 0.0017 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina TACACACACA (29) 3.7 0.0037 P10.5 crx- retina CAAAAGAAGG (7) 1.9 0.0019 P10.5 crx- retina TGAGCCAACT (2) 1.9 0.0019 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina CGAAAGGTAA 1.9 0.0019 P10.5 crx+ retina TACACACACA (29) 1.9 0.0019 P10.5 crx+ retina TACGGTGACT 1.9 0.0019 P10.5 crx+ retina TGAGCCAACT (2) 1.9 0.0019 P10.5 crx+ retina TGTTTTTTTT (9) 1.9 0.0019 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal TACACACACA (29) 5.6 0.0056 Adult retinal CGAAAGGTAA 3.7 0.0037 Adult retinal TGAGCCAACT (2) 3.7 0.0037 Adult retinal CAAAAGAAGG (7) 1.9 0.0019 ONL CCTTTAATCC (355) 84.3 0.0843 ONL TACACACACA (29) 13.4 0.0134 ONL CAAAAGAAGG (7) 1.9 0.0019 ONL CGAAAGGTAA 1.9 0.0019 ONL TACGGTGACT 1.9 0.0019 ONL TGAGCCAACT (2) 1.9 0.0019