Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.138617
AW060232
expressed sequence AW060232
5
269704
Mm.138617
D930038J03Rik
RIKEN cDNA D930038J03 gene
5
319668
Human Homolog
DKFZp761B128[hypothetical protein DKFZp761B128]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 83 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CGGTTGCTGG
(
6
)
17.9
0.0179
P8 Cb GC
GAAGTGTAAG (
4
)
6.5
0.0065
P8 Cb GC
CAGTCCTTTG
(
4
)
3.3
0.0033
P8 Cb GC
CACACTCACT
(
2
)
1.6
0.0016
P8 Cb GC
TTCCAACTTG
(
2
)
1.6
0.0016
Cb medulloblastoma
CGGTTGCTGG
(
6
)
6.9
0.0069
Cb medulloblastoma
GAAGTGTAAG (
4
)
4.6
0.0046
Cb medulloblastoma
CAGTCCTTTG
(
4
)
2.3
0.0023
Cb medulloblastoma
GGTGCTGGGA (
14
)
2.3
0.0023
P8 GC+1d culture
CGGTTGCTGG
(
6
)
20.5
0.0205
P8 GC+1d culture
GAAGTGTAAG (
4
)
2.3
0.0023
P8 GC+1d culture
GTGACACTCA (
5
)
1.1
0.0011
P8 GC+SHH+1d culture
CGGTTGCTGG
(
6
)
18.7
0.0187
P8 GC+SHH+1d culture
GAAGTGTAAG (
4
)
5.9
0.0059
P8 GC+SHH+1d culture
GCTCAGCACC (
3
)
2.3
0.0023
P8 GC+SHH+1d culture
GTGACACTCA (
5
)
1.2
0.0012
P8 GC+SHH+1d culture
TTCCAACTTG
(
2
)
1.2
0.0012
3T3 fibroblasts
CGGTTGCTGG
(
6
)
10.5
0.0105
3T3 fibroblasts
CAGTCCTTTG
(
4
)
3.5
0.0035
3T3 fibroblasts
GAAGTGTAAG (
4
)
3.5
0.0035
E15 cortex
CGGTTGCTGG
(
6
)
54.4
0.0544
E15 cortex
GGTGCTGGGA (
14
)
4.9
0.0049
P1 cortex
CGGTTGCTGG
(
6
)
4.5
0.0045
Hypothalamus
CGGTTGCTGG
(
6
)
5.4
0.0054
Hypothalamus
GGTGCTGGGA (
14
)
3.6
0.0036
Hypothalamus
ACCTCCTTTG (
3
)
1.8
0.0018
Hypothalamus
CACACTCACT
(
2
)
1.8
0.0018
Hypothalamus
GAAGTGTAAG (
4
)
1.8
0.0018
Hypothalamus
TTCCCAACTT (
4
)
1.8
0.0018
E12.5 retina
CGGTTGCTGG
(
6
)
30
0.03
E12.5 retina
GAAGTGTAAG (
4
)
3.8
0.0038
E12.5 retina
GCTCAGCACC (
3
)
1.9
0.0019
E12.5 retina
GGTGCTGGGA (
14
)
1.9
0.0019
E14.5 retina
CGGTTGCTGG
(
6
)
31
0.031
E14.5 retina
GAAGTGTAAG (
4
)
3.6
0.0036
E14.5 retina
GCATACTGTT (
10
)
1.8
0.0018
E14.5 retina
GGTGCTGGGA (
14
)
1.8
0.0018
E16.5 retina
CGGTTGCTGG
(
6
)
36.2
0.0362
E16.5 retina
GAAGTGTAAG (
4
)
3.6
0.0036
E16.5 retina
CACACTCACT
(
2
)
1.8
0.0018
E16.5 retina
CAGTCCTTTG
(
4
)
1.8
0.0018
E16.5 retina
GCATACTGTT (
10
)
1.8
0.0018
E18.5 retina
CGGTTGCTGG
(
6
)
9.1
0.0091
E18.5 retina
GAAGTGTAAG (
4
)
9.1
0.0091
P0.5 retina
CGGTTGCTGG
(
6
)
15.7
0.0157
P0.5 retina
GGTGCTGGGA (
14
)
3.9
0.0039
P0.5 retina
CAGTCCTTTG
(
4
)
2
0.002
P0.5 retina
GAAGTGTAAG (
4
)
2
0.002
P0.5 retina
GTGACACTCA (
5
)
2
0.002
P2.5 retina
CGGTTGCTGG
(
6
)
22.9
0.0229
P2.5 retina
GAAGTGTAAG (
4
)
14.1
0.0141
P2.5 retina
GGTGCTGGGA (
14
)
1.8
0.0018
P4.5 retina
CGGTTGCTGG
(
6
)
21.8
0.0218
P4.5 retina
GAAGTGTAAG (
4
)
9.9
0.0099
P4.5 retina
TTGCCAGTCT (
3
)
4
0.004
P4.5 retina
TTCCCAACTT (
4
)
2
0.002
P6.5 retina
GAAGTGTAAG (
4
)
21.7
0.0217
P6.5 retina
CGGTTGCTGG
(
6
)
16.7
0.0167
P6.5 retina
GGTGCTGGGA (
14
)
3.3
0.0033
P6.5 retina
GCATACTGTT (
10
)
1.7
0.0017
P6.5 retina
GTGACACTCA (
5
)
1.7
0.0017
P6.5 retina
TTCCCAACTT (
4
)
1.7
0.0017
P10.5 crx- retina
CGGTTGCTGG
(
6
)
40.9
0.0409
P10.5 crx- retina
GAAGTGTAAG (
4
)
3.7
0.0037
P10.5 crx- retina
ACCTCCTTTG (
3
)
1.9
0.0019
P10.5 crx+ retina
CGGTTGCTGG
(
6
)
25
0.025
P10.5 crx+ retina
GAAGTGTAAG (
4
)
15.4
0.0154
P10.5 crx+ retina
CACACTCACT
(
2
)
1.9
0.0019
P10.5 crx+ retina
GGTGCTGGGA (
14
)
1.9
0.0019
P10.5 crx+ retina
GTGACACTCA (
5
)
1.9
0.0019
Adult retinal
CGGTTGCTGG
(
6
)
13
0.013
Adult retinal
GAAGTGTAAG (
4
)
7.4
0.0074
Adult retinal
GGTGCTGGGA (
14
)
5.6
0.0056
Adult retinal
GCTCAGCACC (
3
)
3.7
0.0037
Adult retinal
ACCTCCTTTG (
3
)
1.9
0.0019
Adult retinal
GTGACACTCA (
5
)
1.9
0.0019
Adult retinal
TTGCCAGTCT (
3
)
1.9
0.0019
ONL
GAAGTGTAAG (
4
)
19.2
0.0192
ONL
CGGTTGCTGG
(
6
)
15.3
0.0153
ONL
GGTGCTGGGA (
14
)
5.7
0.0057
ONL
CAGTCCTTTG
(
4
)
3.8
0.0038
ONL
GCTCAGCACC (
3
)
1.9
0.0019
ONL
TTCCAACTTG
(
2
)
1.9
0.0019
