Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1387	Rab11a	RAB11a, member RAS oncogene family	9		53869
Gene Ontology	DNA binding | GTP binding | protein transport | regulation of transcription, DNA-dependent | small GTPase mediated signal transduction | two-component signal transduction system (phosphorelay)
Human Homolog	RAB11A[RAB11A, member RAS oncogene family]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 69 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATGTGTGGGG CTATGGCTTC CTCTGTATTT (2) GAAGCCTGTC (2) TTCCGCCCAC (3) 14.6 0.0146 Cb medulloblastoma ATGGGGATTC CTATGGCTTC CTCTGTATTT (2) 16.1 0.0161 P8 GC+1d culture ATGGGGATTC ATGTGTGGGG CTATGGCTTC CTCTGTATTT (2) TCTTAAGTCT TTCCGCCCAC (3) 27.3 0.0273 P8 GC+SHH+1d culture ATGTGTGGGG CTATGGCTTC CTCTGTATTT (2) TCTTAAGTCT TTCCGCCCAC (3) 23.3 0.0233 3T3 fibroblasts CTTGTGGGCA 3.5 0.0035 P1 cortex CTCTGTATTT (2) 4.5 0.0045 Hypothalamus AGCAATAAAA ATGGGGATTC ATGTGTGGGG CTATGGCTTC CTCTGTATTT (2) 14.4 0.0144 E12.5 retina AGCAATAAAA CTATGGCTTC CTCTGTATTT (2) 20.7 0.0207 E14.5 retina ATGGGGATTC ATGTGTGGGG CTATGGCTTC CTCTGTATTT (2) TAATAACTAG 14.5 0.0145 E16.5 retina ATGTGTGGGG CTATGGCTTC CTCTGTATTT (2) 12.7 0.0127 E18.5 retina ATGGGGATTC CTATGGCTTC CTCTGTATTT (2) TAATAACTAG 19.9 0.0199 P0.5 retina ATGGGGATTC ATGTGTGGGG CTATGGCTTC CTCTGTATTT (2) CTTGTGGGCA TTCCGCCCAC (3) 23.7 0.0237 P2.5 retina ATGTGTGGGG CTATGGCTTC CTCTGTATTT (2) TCTTAAGTCT 15.8 0.0158 P4.5 retina AGCAATAAAA CTATGGCTTC 9.9 0.0099 P6.5 retina AGCAATAAAA ATGTGTGGGG CTATGGCTTC 15 0.015 P10.5 crx- retina ATGGGGATTC ATGTGTGGGG CTATGGCTTC GAAGCCTGTC (2) TCTTAAGTCT 15 0.015 P10.5 crx+ retina ATGGGGATTC ATGTGTGGGG CTATGGCTTC CTCTGTATTT (2) TTCCGCCCAC (3) 15.3 0.0153 ONL ATGGGGATTC GAAGCCTGTC (2) TAATAACTAG 5.7 0.0057