Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.13944	Rps9	ribosomal protein S9	7		76846
Gene Ontology	intracellular | protein biosynthesis | ribonucleoprotein complex | ribosome | RNA binding | structural constituent of ribosome
Human Homolog	RPS9[ribosomal protein S9]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 163 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCCGTGTGCT (4) 47.3 0.0473 P8 Cb GC CCGTGTGTTC (5) 13.1 0.0131 P8 Cb GC AAAAATAAAA (20) 8.2 0.0082 P8 Cb GC CCGGTCGCCA 8.2 0.0082 P8 Cb GC GCTTTAAAAA (7) 4.9 0.0049 P8 Cb GC AAGCTGGATT (5) 3.3 0.0033 P8 Cb GC GCCGTGTGCT (3) 3.3 0.0033 P8 Cb GC GGTTTGATTT (4) 1.6 0.0016 P8 Cb GC GTGAATAGAT (2) 1.6 0.0016 Cb medulloblastoma CCGTGTGTTC (5) 27.7 0.0277 Cb medulloblastoma AAAAATAAAA (20) 20.8 0.0208 Cb medulloblastoma CCCGTGTGCT (4) 16.2 0.0162 Cb medulloblastoma AGGAACGAGG (3) 6.9 0.0069 Cb medulloblastoma GCCGTGTGCT (3) 6.9 0.0069 Cb medulloblastoma AAGCTGGATT (5) 2.3 0.0023 Cb medulloblastoma CCGGTCGCCA 2.3 0.0023 P8 GC+1d culture CCCGTGTGCT (4) 73.1 0.0731 P8 GC+1d culture AAAAATAAAA (20) 11.4 0.0114 P8 GC+1d culture CCGTGTGTTC (5) 8 0.008 P8 GC+1d culture AAGCTGGATT (5) 6.8 0.0068 P8 GC+1d culture AGAGCTTTAA (11) 1.1 0.0011 P8 GC+1d culture AGGAACGAGG (3) 1.1 0.0011 P8 GC+1d culture CTTCCCCGCT (5) 1.1 0.0011 P8 GC+1d culture GCCGTGTGCT (3) 1.1 0.0011 P8 GC+1d culture GGACATTTAA (5) 1.1 0.0011 P8 GC+1d culture GGTTTGATTT (4) 1.1 0.0011 P8 GC+SHH+1d culture CCCGTGTGCT (4) 50.3 0.0503 P8 GC+SHH+1d culture CCGTGTGTTC (5) 11.7 0.0117 P8 GC+SHH+1d culture GCCGTGTGCT (3) 7 0.007 P8 GC+SHH+1d culture GCTTTAAAAA (7) 7 0.007 P8 GC+SHH+1d culture AAAAATAAAA (20) 5.9 0.0059 P8 GC+SHH+1d culture AGAGCTTTAA (11) 3.5 0.0035 P8 GC+SHH+1d culture GTGAATAGAT (2) 3.5 0.0035 P8 GC+SHH+1d culture AAGCTGGATT (5) 2.3 0.0023 P8 GC+SHH+1d culture AGGAACGAGG (3) 1.2 0.0012 P8 GC+SHH+1d culture GGTTTGATTT (4) 1.2 0.0012 3T3 fibroblasts CCCGTGTGCT (4) 224.3 0.2243 3T3 fibroblasts CCGTGTGTTC (5) 14 0.014 3T3 fibroblasts CCGGTCGCCA 7 0.007 3T3 fibroblasts AGGAACGAGG (3) 3.5 0.0035 3T3 fibroblasts CCCGTGCGCT (2) 3.5 0.0035 3T3 fibroblasts GCCGTGTGCT (3) 3.5 0.0035 3T3 fibroblasts GGGGTGCTGG (4) 3.5 0.0035 E15 cortex CCCGTGTGCT (4) 148.4 0.1484 E15 cortex AAGCTGGATT (5) 4.9 0.0049 E15 cortex CCCGTGCGCT (2) 4.9 0.0049 E15 cortex GGTTTGATTT (4) 4.9 0.0049 P1 cortex CCCGTGTGCT (4) 54.5 0.0545 P1 cortex CCGTGTGTTC (5) 13.6 0.0136 P1 cortex GCCGTGTGCT (3) 13.6 0.0136 P1 cortex CCGGTCGCCA 9.1 0.0091 P1 cortex AAAAATAAAA (20) 4.5 0.0045 P1 cortex AAGCTGGATT (5) 4.5 0.0045 P1 cortex AGAGCTTTAA (11) 4.5 0.0045 P1 cortex GTGAATAGAT (2) 4.5 0.0045 Hypothalamus TGGTTGGGGA (6) 70.6 0.0706 Hypothalamus AAAAATAAAA (20) 14.5 0.0145 Hypothalamus CCCGTGTGCT (4) 12.7 0.0127 Hypothalamus GCCGTGTGCT (3) 12.7 0.0127 Hypothalamus GTGAATAGAT (2) 5.4 0.0054 Hypothalamus CCGGTCGCCA 1.8 0.0018 Hypothalamus CCGTGTGTTC (5) 1.8 0.0018 Hypothalamus GGTTTGATTT (4) 1.8 0.0018 E12.5 retina CCCGTGTGCT (4) 48.8 0.0488 E12.5 retina CCGTGTGTTC (5) 5.6 0.0056 E12.5 retina AAGCTGGATT (5) 3.8 0.0038 E12.5 retina GCTTTAAAAA (7) 3.8 0.0038 E12.5 retina AAAAATAAAA (20) 1.9 0.0019 E12.5 retina CCCGTGCGCT (2) 1.9 0.0019 E12.5 retina CCGGTCGCCA 1.9 0.0019 E12.5 retina GCCGTGTGCT (3) 1.9 0.0019 E12.5 retina GGTTTGATTT (4) 1.9 0.0019 E14.5 retina CCCGTGTGCT (4) 27.3 0.0273 E14.5 retina AAAAATAAAA (20) 16.4 0.0164 E14.5 retina CCGTGTGTTC (5) 12.8 0.0128 E14.5 retina GCCGTGTGCT (3) 7.3 0.0073 E14.5 retina GCTTTAAAAA (7) 7.3 0.0073 E14.5 retina GTGAATAGAT (2) 3.6 0.0036 E14.5 retina AAGCTGGATT (5) 1.8 0.0018 E14.5 retina CCGGTCGCCA 1.8 0.0018 E16.5 retina CCCGTGTGCT (4) 48.9 0.0489 E16.5 retina AAAAATAAAA (20) 9.1 0.0091 E16.5 retina CCGTGTGTTC (5) 9.1 0.0091 E16.5 retina GCCGTGTGCT (3) 7.2 0.0072 E16.5 retina AAGCTGGATT (5) 5.4 0.0054 E16.5 retina CCGGTCGCCA 3.6 0.0036 E16.5 retina GTGAATAGAT (2) 3.6 0.0036 E16.5 retina AGGAACGAGG (3) 1.8 0.0018 E16.5 retina CTTCCCCGCT (5) 1.8 0.0018 E16.5 retina GCTTTAAAAA (7) 1.8 0.0018 E18.5 retina CCCGTGTGCT (4) 23.6 0.0236 E18.5 retina CCGTGTGTTC (5) 9.1 0.0091 E18.5 retina AAAAATAAAA (20) 7.3 0.0073 E18.5 retina GCCGTGTGCT (3) 3.6 0.0036 E18.5 retina GCTTTAAAAA (7) 3.6 0.0036 E18.5 retina AAGCTGGATT (5) 1.8 0.0018 E18.5 retina AGAGCTTTAA (11) 1.8 0.0018 E18.5 retina GGGGTGCTGG (4) 1.8 0.0018 E18.5 retina GGTTTGATTT (4) 1.8 0.0018 E18.5 retina TGGTTGGGGA (6) 1.8 0.0018 P0.5 retina CCCGTGTGCT (4) 119.7 0.1197 P0.5 retina GCCGTGTGCT (3) 11.8 0.0118 P0.5 retina AAGCTGGATT (5) 5.9 0.0059 P0.5 retina CCGTGTGTTC (5) 5.9 0.0059 P0.5 retina AAAAATAAAA (20) 3.9 0.0039 P0.5 retina AGGAACGAGG (3) 3.9 0.0039 P0.5 retina GTGAATAGAT (2) 3.9 0.0039 P0.5 retina CTTCCCCGCT (5) 2 0.002 P0.5 retina GCTTTAAAAA (7) 2 0.002 P0.5 retina GGTTTGATTT (4) 2 0.002 P2.5 retina CCCGTGTGCT (4) 21.1 0.0211 P2.5 retina CCGTGTGTTC (5) 12.3 0.0123 P2.5 retina GCCGTGTGCT (3) 8.8 0.0088 P2.5 retina GCTTTAAAAA (7) 7 0.007 P2.5 retina GTGAATAGAT (2) 5.3 0.0053 P2.5 retina AAAAATAAAA (20) 1.8 0.0018 P2.5 retina AAGCTGGATT (5) 1.8 0.0018 P2.5 retina AGAGCTTTAA (11) 1.8 0.0018 P2.5 retina AGGAACGAGG (3) 1.8 0.0018 P2.5 retina CCGGTCGCCA 1.8 0.0018 P2.5 retina GGACATTTAA (5) 1.8 0.0018 P2.5 retina GGGGTGCTGG (4) 1.8 0.0018 P2.5 retina TGGTTGGGGA (6) 1.8 0.0018 P4.5 retina CCCGTGTGCT (4) 23.8 0.0238 P4.5 retina AAAAATAAAA (20) 5.9 0.0059 P4.5 retina AAGCTGGATT (5) 5.9 0.0059 P4.5 retina CCGTGTGTTC (5) 5.9 0.0059 P4.5 retina GCCGTGTGCT (3) 5.9 0.0059 P4.5 retina GGTTTGATTT (4) 5.9 0.0059 P4.5 retina GGACATTTAA (5) 4 0.004 P4.5 retina GTGAATAGAT (2) 4 0.004 P6.5 retina CCCGTGTGCT (4) 40 0.04 P6.5 retina AAAAATAAAA (20) 13.3 0.0133 P6.5 retina CCGTGTGTTC (5) 11.7 0.0117 P6.5 retina GCCGTGTGCT (3) 10 0.01 P6.5 retina AAGCTGGATT (5) 3.3 0.0033 P6.5 retina AGAGCTTTAA (11) 3.3 0.0033 P6.5 retina AGGAACGAGG (3) 3.3 0.0033 P6.5 retina GGACACTGAA 3.3 0.0033 P6.5 retina GGGGTGCTGG (4) 1.7 0.0017 P6.5 retina GGTTTGATTT (4) 1.7 0.0017 P10.5 crx- retina CCCGTGTGCT (4) 144.9 0.1449 P10.5 crx- retina GCCGTGTGCT (3) 18.6 0.0186 P10.5 crx- retina CCGTGTGTTC (5) 5.6 0.0056 P10.5 crx- retina AAAAATAAAA (20) 1.9 0.0019 P10.5 crx- retina AAGCTGGATT (5) 1.9 0.0019 P10.5 crx- retina GTGAATAGAT (2) 1.9 0.0019 P10.5 crx+ retina CCCGTGTGCT (4) 51.9 0.0519 P10.5 crx+ retina GCCGTGTGCT (3) 15.4 0.0154 P10.5 crx+ retina CCGTGTGTTC (5) 9.6 0.0096 P10.5 crx+ retina AAGCTGGATT (5) 5.8 0.0058 P10.5 crx+ retina AAAAATAAAA (20) 3.8 0.0038 P10.5 crx+ retina AGGAACGAGG (3) 1.9 0.0019 Adult retinal CCCGTGTGCT (4) 27.8 0.0278 Adult retinal CCGTGTGTTC (5) 18.5 0.0185 Adult retinal GCCGTGTGCT (3) 11.1 0.0111 Adult retinal AAAAATAAAA (20) 1.9 0.0019 Adult retinal AAGCTGGATT (5) 1.9 0.0019 Adult retinal CTAATATTTG (15) 1.9 0.0019 Adult retinal GGTTTGATTT (4) 1.9 0.0019 ONL CCCGTGTGCT (4) 19.2 0.0192 ONL CCGTGTGTTC (5) 1.9 0.0019 ONL GCCGTGTGCT (3) 1.9 0.0019