Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.139675	Tssc4	tumor-suppressing subchromosomal transferable fragment 4	7	7 69.3 cM	56844
Human Homolog	TSSC4[tumor suppressing subtransferable candidate 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 86 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTTTTTTTT (433) 4.9 0.0049 P8 Cb GC GGGGGGGGCA (8) 3.3 0.0033 P8 Cb GC GAAACCAAAA (6) 1.6 0.0016 P8 Cb GC GAAACCAACA (2) 1.6 0.0016 P8 Cb GC GCAGCAAGAA (6) 1.6 0.0016 Cb medulloblastoma CCCGATCCTC (2) 2.3 0.0023 Cb medulloblastoma GAAACCAACA (2) 2.3 0.0023 Cb medulloblastoma TTTTTTTTTT (433) 2.3 0.0023 P8 GC+1d culture TTTTTTTTTT (433) 13.7 0.0137 P8 GC+1d culture GGGGGGGGCA (8) 9.1 0.0091 P8 GC+1d culture GTGCTCCTCC (2) 9.1 0.0091 P8 GC+1d culture GAAACCAAAA (6) 5.7 0.0057 P8 GC+1d culture GAAACCAACA (2) 3.4 0.0034 P8 GC+1d culture CCCGATCCTC (2) 2.3 0.0023 P8 GC+SHH+1d culture GTGCTCCTCC (2) 5.9 0.0059 P8 GC+SHH+1d culture TTTTTTTTTT (433) 5.9 0.0059 P8 GC+SHH+1d culture GAAACCAACA (2) 4.7 0.0047 P8 GC+SHH+1d culture GGGGGGGGCA (8) 4.7 0.0047 P8 GC+SHH+1d culture GAAACCAAAA (6) 2.3 0.0023 P8 GC+SHH+1d culture GCAGCAAGAA (6) 1.2 0.0012 3T3 fibroblasts GCAGCAAGAA (6) 7 0.007 3T3 fibroblasts CCCGATCCTC (2) 3.5 0.0035 E15 cortex GTGCTCCTCC (2) 9.9 0.0099 E15 cortex GCAGCAAGAA (6) 4.9 0.0049 E15 cortex TTTTTTTTTT (433) 4.9 0.0049 P1 cortex GCAGCAAGAA (6) 4.5 0.0045 P1 cortex TTTTTTTTTT (433) 4.5 0.0045 Hypothalamus TTTTTTTTTT (433) 7.2 0.0072 Hypothalamus GTGCTCCTCC (2) 3.6 0.0036 Hypothalamus CCCGATCCTC (2) 1.8 0.0018 Hypothalamus GCAGCAAGAA (6) 1.8 0.0018 E12.5 retina TTTTTTTTTT (433) 7.5 0.0075 E12.5 retina GAAACCAAAA (6) 3.8 0.0038 E12.5 retina GAAACCAACA (2) 3.8 0.0038 E12.5 retina AACGCAGGTC 1.9 0.0019 E12.5 retina GTGCTCCTCC (2) 1.9 0.0019 E14.5 retina TTTTTTTTTT (433) 23.7 0.0237 E14.5 retina GAAACCAACA (2) 3.6 0.0036 E14.5 retina GAAACCAAAA (6) 1.8 0.0018 E14.5 retina GCAGCAAGAA (6) 1.8 0.0018 E16.5 retina TTTTTTTTTT (433) 5.4 0.0054 E16.5 retina GAAACCAACA (2) 3.6 0.0036 E16.5 retina GCAGCAAGAA (6) 3.6 0.0036 E16.5 retina GTGCTCCTCC (2) 3.6 0.0036 E18.5 retina TTTTTTTTTT (433) 10.9 0.0109 E18.5 retina GAAACCAAAA (6) 3.6 0.0036 E18.5 retina GAAACCAACA (2) 3.6 0.0036 E18.5 retina GCAGCAAGAA (6) 3.6 0.0036 P0.5 retina TTTTTTTTTT (433) 9.8 0.0098 P0.5 retina GCAGCAAGAA (6) 5.9 0.0059 P0.5 retina GAAACCAAAA (6) 3.9 0.0039 P0.5 retina AACGCAGGTC 2 0.002 P0.5 retina GTGCTCCTCC (2) 2 0.002 P2.5 retina GAAACCAACA (2) 10.6 0.0106 P2.5 retina TTTTTTTTTT (433) 7 0.007 P2.5 retina GCAGCAAGAA (6) 1.8 0.0018 P2.5 retina GTGCTCCTCC (2) 1.8 0.0018 P4.5 retina TTTTTTTTTT (433) 9.9 0.0099 P4.5 retina GAAACCAACA (2) 4 0.004 P4.5 retina CCCGATCCTC (2) 2 0.002 P4.5 retina GCAGCAAGAA (6) 2 0.002 P4.5 retina GTGCTCCTCC (2) 2 0.002 P6.5 retina GAAACCAACA (2) 8.3 0.0083 P6.5 retina TTTTTTTTTT (433) 8.3 0.0083 P6.5 retina GCAGCAAGAA (6) 6.7 0.0067 P6.5 retina CCCGATCCTC (2) 5 0.005 P6.5 retina GTGCTCCTCC (2) 5 0.005 P10.5 crx- retina GAAACCAACA (2) 7.4 0.0074 P10.5 crx- retina GCAGCAAGAA (6) 1.9 0.0019 P10.5 crx+ retina CCCGATCCTC (2) 3.8 0.0038 P10.5 crx+ retina GAAACCAACA (2) 3.8 0.0038 P10.5 crx+ retina TTTTTTTTTT (433) 3.8 0.0038 P10.5 crx+ retina GAAACCAAAA (6) 1.9 0.0019 P10.5 crx+ retina GCAGCAAGAA (6) 1.9 0.0019 P10.5 crx+ retina GGGGGGGGCA (8) 1.9 0.0019 P10.5 crx+ retina GTGCTCCTCC (2) 1.9 0.0019 Adult retinal TTTTTTTTTT (433) 7.4 0.0074 Adult retinal GCAGCAAGAA (6) 5.6 0.0056 Adult retinal GAAACCAACA (2) 3.7 0.0037 Adult retinal GTGCTCCTCC (2) 3.7 0.0037 Adult retinal AACGCAGGTC 1.9 0.0019 Adult retinal CCCGATCCTC (2) 1.9 0.0019 ONL GAAACCAACA (2) 5.7 0.0057 ONL GTGCTCCTCC (2) 3.8 0.0038 ONL TTTTTTTTTT (433) 3.8 0.0038 ONL GGGGGGGGCA (8) 1.9 0.0019