Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.141054
1110011C06Rik
RIKEN cDNA 1110011C06 gene
11
68494
Mm.141054
5530600A18Rik
RIKEN cDNA 5530600A18 gene
11
71452
Human Homolog
MGC15396[hypothetical protein MGC15396]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 59 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGTTCACACT
(
2
)
3.3
0.0033
P8 Cb GC
TCTAAAAAAA (
15
)
1.6
0.0016
P8 Cb GC
TGAAGATGAC (
4
)
1.6
0.0016
Cb medulloblastoma
TCTAAAAAAA (
15
)
13.9
0.0139
Cb medulloblastoma
TGTTCACACT
(
2
)
13.9
0.0139
Cb medulloblastoma
CTCGTGACAC
(
2
)
2.3
0.0023
P8 GC+1d culture
TCTAAAAAAA (
15
)
6.8
0.0068
P8 GC+1d culture
TGTTCACACT
(
2
)
3.4
0.0034
P8 GC+1d culture
GACAGGTGGT
(
4
)
2.3
0.0023
P8 GC+SHH+1d culture
TGTTCACACT
(
2
)
5.9
0.0059
P8 GC+SHH+1d culture
TCTAAAAAAA (
15
)
3.5
0.0035
P8 GC+SHH+1d culture
CTTTAACTAT
(
2
)
1.2
0.0012
3T3 fibroblasts
GACAGGTGGT
(
4
)
3.5
0.0035
3T3 fibroblasts
TGTTCACACT
(
2
)
3.5
0.0035
P1 cortex
TCTAAAAAAA (
15
)
9.1
0.0091
P1 cortex
TGAAGATGAC (
4
)
4.5
0.0045
Hypothalamus
TCTAAAAAAA (
15
)
10.9
0.0109
Hypothalamus
TGTTCACACT
(
2
)
9.1
0.0091
Hypothalamus
CTTTAACTAT
(
2
)
1.8
0.0018
Hypothalamus
TGAAGATGAC (
4
)
1.8
0.0018
E12.5 retina
TCTAAAAAAA (
15
)
3.8
0.0038
E12.5 retina
TGAAGATGAC (
4
)
1.9
0.0019
E12.5 retina
TGTTCACACT
(
2
)
1.9
0.0019
E14.5 retina
TGTTCACACT
(
2
)
10.9
0.0109
E14.5 retina
TCTAAAAAAA (
15
)
5.5
0.0055
E14.5 retina
CTCGTGACAC
(
2
)
1.8
0.0018
E14.5 retina
CTTTAACTAT
(
2
)
1.8
0.0018
E16.5 retina
TCTAAAAAAA (
15
)
3.6
0.0036
E16.5 retina
CTTTAACTAT
(
2
)
1.8
0.0018
E16.5 retina
TGTTCACACT
(
2
)
1.8
0.0018
E18.5 retina
TCTAAAAAAA (
15
)
10.9
0.0109
E18.5 retina
TGTTCACACT
(
2
)
5.5
0.0055
E18.5 retina
CTTTAACTAT
(
2
)
3.6
0.0036
P0.5 retina
TGTTCACACT
(
2
)
3.9
0.0039
P0.5 retina
CTCGTGACAC
(
2
)
2
0.002
P0.5 retina
CTTTAACTAT
(
2
)
2
0.002
P0.5 retina
TCTAAAAAAA (
15
)
2
0.002
P2.5 retina
TGTTCACACT
(
2
)
10.6
0.0106
P2.5 retina
TCTAAAAAAA (
15
)
5.3
0.0053
P2.5 retina
CTTTAACTAT
(
2
)
1.8
0.0018
P2.5 retina
TGAAGATGAC (
4
)
1.8
0.0018
P4.5 retina
TCTAAAAAAA (
15
)
11.9
0.0119
P4.5 retina
TGTTCACACT
(
2
)
5.9
0.0059
P4.5 retina
GACAGGTGGT
(
4
)
2
0.002
P6.5 retina
TCTAAAAAAA (
15
)
10
0.01
P6.5 retina
TGTTCACACT
(
2
)
10
0.01
P6.5 retina
GACAGGTGGT
(
4
)
1.7
0.0017
P6.5 retina
TGAAGATGAC (
4
)
1.7
0.0017
P10.5 crx- retina
TGTTCACACT
(
2
)
7.4
0.0074
P10.5 crx- retina
TCTAAAAAAA (
15
)
1.9
0.0019
P10.5 crx+ retina
TGTTCACACT
(
2
)
11.5
0.0115
P10.5 crx+ retina
TCTAAAAAAA (
15
)
3.8
0.0038
Adult retinal
TGTTCACACT
(
2
)
14.8
0.0148
Adult retinal
GAGGAGTGAG
(
3
)
5.6
0.0056
Adult retinal
CTTTAACTAT
(
2
)
1.9
0.0019
Adult retinal
TCTAAAAAAA (
15
)
1.9
0.0019
ONL
TGTTCACACT
(
2
)
5.7
0.0057
ONL
GAGGAGTGAG
(
3
)
3.8
0.0038
ONL
TCTAAAAAAA (
15
)
3.8
0.0038
