Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.142822	Ewsr1	Ewing sarcoma breakpoint region 1	11		14030
Gene Ontology	calmodulin binding | DNA binding | nucleus | regulation of transcription, DNA-dependent | RNA binding
Human Homolog	EWSR1[Ewing sarcoma breakpoint region 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 140 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCACCTCGTG (2) CTCACAAGGG GACCGTGGTG GAGGAGGAGG (2) GATGAAGGAC (3) GGAAGCCCCT (2) GTCTACAGAG (2) GTTGTGATTT TATTTTTATA (3) 63.5 0.0635 Cb medulloblastoma CATCCATTGT CTCACAAGGG GGTGTCTATG GTCTACAGAG (2) GTTGTGATTT TTCATAAAGG (2) 23 0.023 P8 GC+1d culture CTCACAAGGG GACCGTGGTG GGTGTCTATG GTCTACAGAG (2) GTTGTGATTT TATTTTTATA (3) TCCTCCATAT (5) 37.5 0.0375 P8 GC+SHH+1d culture CTCACAAGGG GACCGTGGTG GAGGAGGAGG (2) GGTGTCTATG GTCTACAGAG (2) GTTGTGATTT TATTTTTATA (3) 45.7 0.0457 3T3 fibroblasts CCACCTCGTG (2) CTCACAAGGG GACCGTGGTG GAGGAGGAGG (2) GTCTACAGAG (2) 63 0.063 E15 cortex CTCACAAGGG GACCGTGGTG GAGGAGGAGG (2) GTCTACAGAG (2) GTTGTGATTT 54.3 0.0543 P1 cortex CCACCTCGTG (2) CTCACAAGGG GACCGTGGTG GAGGAGGAGG (2) GGAAGCCCCT (2) GTCTACAGAG (2) GTTGTGATTT TCCTCCATAT (5) 86.1 0.0861 Hypothalamus CTCACAAGGG GACCGTGGTG GAGGAGGAGG (2) GGTGTCTATG GTCTACAGAG (2) GTTGTGATTT TATTTTTATA (3) TCCTCCATAT (5) 30.6 0.0306 E12.5 retina CTCACAAGGG GACCGTGGTG GAGGAGGAGG (2) GATGAAGGAC (3) GGAAGCCCCT (2) GTTGTGATTT 65.8 0.0658 E14.5 retina CCACCTCGTG (2) CTCACAAGGG GACCGTGGTG GTCTACAGAG (2) GTTGTGATTT TATTTTTATA (3) 85.6 0.0856 E16.5 retina CCACCAGGGC CTCACAAGGG GACCGTGGTG GGAAGCCCCT (2) GTCTACAGAG (2) GTTGTGATTT TATTTTTATA (3) 86.9 0.0869 E18.5 retina CATCCATTGT CTCACAAGGG GACCGTGGTG GGAAGCCCCT (2) GGTGGTTATG GGTGTCTATG GTCTACAGAG (2) GTTGTGATTT TATTTTTATA (3) 78.2 0.0782 P0.5 retina CATCCATTGT CCACCAGGGC CTCACAAGGG GACCGTGGTG GTCTACAGAG (2) GTTGTGATTT TTCATAAAGG (2) 70.7 0.0707 P2.5 retina CTCACAAGGG GACCGTGGTG GAGGAGGAGG (2) GGTGTCTATG GTTGTGATTT TATTTTTATA (3) 58.2 0.0582 P4.5 retina CTCACAAGGG GACCGTGGTG GAGGAGGAGG (2) GGAAGCCCCT (2) GGTGTCTATG GTCTACAGAG (2) GTTGTGATTT TATTTTTATA (3) TCCTCCATAT (5) 99.2 0.0992 P6.5 retina CTCACAAGGG GACCGTGGTG GTCTACAGAG (2) GTTGTGATTT TATTTTTATA (3) TTCATAAAGG (2) 83.4 0.0834 P10.5 crx- retina CCACCAGGGC CTCACAAGGG GACCGTGGTG GAGGAGGAGG (2) GGAAGCCCCT (2) GTCTACAGAG (2) GTTGTGATTT 113.5 0.1135 P10.5 crx+ retina CTCACAAGGG GACCGTGGTG GGTGGTTATG GTCTACAGAG (2) GTTGTGATTT 50 0.05 Adult retinal CTCACAAGGG GACCGTGGTG GAGGAGGAGG (2) GGAAGCCCCT (2) GGTGGTTATG GTCTACAGAG (2) GTTGTGATTT TATTTTTATA (3) TCCTCCATAT (5) 50.1 0.0501 ONL CCACCAGGGC CTCACAAGGG GACCGTGGTG GAGGAGGAGG (2) GGTGGTTATG GTCTACAGAG (2) GTTGTGATTT TCCTCCATAT (5) 44 0.044