Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.143689	Acsl4	acyl-CoA synthetase long-chain family member 4	X		50790
Gene Ontology	catalytic activity | fatty acid metabolism | integral to membrane | ligase activity | long-chain-fatty-acid-CoA ligase activity | magnesium ion binding | metabolism | regulation of fatty acid metabolism
Human Homolog	ACSL4[acyl-CoA synthetase long-chain family member 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 77 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAATCCAAA 3.3 0.0033 P8 Cb GC GACAAAGGTG (5) 3.3 0.0033 P8 Cb GC TTAACAAATC (3) 3.3 0.0033 P8 Cb GC GATAGAATTT (4) 1.6 0.0016 P8 Cb GC GGTGGATTTA 1.6 0.0016 P8 Cb GC TGTATGTGTG (9) 1.6 0.0016 Cb medulloblastoma GACAAAGGTG (5) 6.9 0.0069 Cb medulloblastoma GATAGAATTT (4) 4.6 0.0046 Cb medulloblastoma TTATCAAAAA (4) 4.6 0.0046 Cb medulloblastoma CACTCACATT (2) 2.3 0.0023 P8 GC+1d culture GACAAAGGTG (5) 8 0.008 P8 GC+1d culture TTATCAAAAA (4) 2.3 0.0023 P8 GC+1d culture CACTCACATT (2) 1.1 0.0011 P8 GC+1d culture TGTATGTGTG (9) 1.1 0.0011 P8 GC+1d culture TTAACAAATC (3) 1.1 0.0011 P8 GC+SHH+1d culture GACAAAGGTG (5) 7 0.007 P8 GC+SHH+1d culture TTAACAAATC (3) 3.5 0.0035 P8 GC+SHH+1d culture TTATCAAAAA (4) 3.5 0.0035 P8 GC+SHH+1d culture AAAATCCAAA 1.2 0.0012 P8 GC+SHH+1d culture CACTCACATT (2) 1.2 0.0012 P8 GC+SHH+1d culture TCAGCCATCA 1.2 0.0012 3T3 fibroblasts GTGCTGTCTG (4) 3.5 0.0035 P1 cortex AAATAAAAAC (10) 4.5 0.0045 P1 cortex TGTATGTGTG (9) 4.5 0.0045 Hypothalamus GACAAAGGTG (5) 7.2 0.0072 Hypothalamus AAAATCCAAA 1.8 0.0018 Hypothalamus GGTGGATTTA 1.8 0.0018 Hypothalamus TCAGCCATCA 1.8 0.0018 Hypothalamus TTATCAAAAA (4) 1.8 0.0018 E12.5 retina GACAAAGGTG (5) 18.8 0.0188 E12.5 retina AAAATCCAAA 1.9 0.0019 E12.5 retina AAATAAAAAC (10) 1.9 0.0019 E12.5 retina CACTCACATT (2) 1.9 0.0019 E12.5 retina TTATCAAAAA (4) 1.9 0.0019 E14.5 retina GACAAAGGTG (5) 5.5 0.0055 E14.5 retina TTATCAAAAA (4) 5.5 0.0055 E14.5 retina TGTATGTGTG (9) 1.8 0.0018 E16.5 retina GACAAAGGTG (5) 16.3 0.0163 E16.5 retina TGTATGTGTG (9) 1.8 0.0018 E18.5 retina AAAATCCAAA 1.8 0.0018 E18.5 retina CACTCACATT (2) 1.8 0.0018 E18.5 retina GACAAAGGTG (5) 1.8 0.0018 E18.5 retina TGTATGTGTG (9) 1.8 0.0018 E18.5 retina TTAACAAATC (3) 1.8 0.0018 P0.5 retina GACAAAGGTG (5) 7.9 0.0079 P0.5 retina GATAGAATTT (4) 2 0.002 P2.5 retina GACAAAGGTG (5) 10.6 0.0106 P2.5 retina AAAATCCAAA 1.8 0.0018 P2.5 retina AAATAAAAAC (10) 1.8 0.0018 P2.5 retina GATAGAATTT (4) 1.8 0.0018 P2.5 retina TTAACAAATC (3) 1.8 0.0018 P2.5 retina TTATCAAAAA (4) 1.8 0.0018 P4.5 retina GGTGGATTTA 2 0.002 P4.5 retina TCAGCCATCA 2 0.002 P4.5 retina TTATCAAAAA (4) 2 0.002 P6.5 retina GACAAAGGTG (5) 5 0.005 P6.5 retina GTGCTGTCTG (4) 3.3 0.0033 P6.5 retina TCAGCCATCA 1.7 0.0017 P6.5 retina TTAACAAATC (3) 1.7 0.0017 P6.5 retina TTATCAAAAA (4) 1.7 0.0017 P10.5 crx- retina CACTCACATT (2) 1.9 0.0019 P10.5 crx- retina GACAAAGGTG (5) 1.9 0.0019 P10.5 crx+ retina GACAAAGGTG (5) 7.7 0.0077 P10.5 crx+ retina TTATCAAAAA (4) 3.8 0.0038 P10.5 crx+ retina AAATAAAAAC (10) 1.9 0.0019 P10.5 crx+ retina GATAGAATTT (4) 1.9 0.0019 P10.5 crx+ retina GGTGGATTTA 1.9 0.0019 Adult retinal GACAAAGGTG (5) 5.6 0.0056 Adult retinal GGTGGATTTA 1.9 0.0019 Adult retinal TGTATGTGTG (9) 1.9 0.0019 ONL GAAGCTGAAA (4) 5.7 0.0057 ONL TTATCAAAAA (4) 3.8 0.0038 ONL AAAATCCAAA 1.9 0.0019 ONL GGTGGATTTA 1.9 0.0019 ONL TCAGCCATCA 1.9 0.0019 ONL TGTATGTGTG (9) 1.9 0.0019 ONL TTAACAAATC (3) 1.9 0.0019