Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.143771
Wdr4
WD repeat domain 4
17
57773
Gene Ontology
extracellular space
|
tRNA processing
Human Homolog
WDR4[WD repeat domain 4]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 63 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
CCCTGCTGCA (
4
)
4.9
0.0049
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
Cb medulloblastoma
GGGGGGGGGG (
112
)
6.9
0.0069
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
CCCTGCTGCA (
4
)
2.3
0.0023
P8 GC+1d culture
CTGGTGGAAG
(
4
)
2.3
0.0023
P8 GC+1d culture
GGGGGGGGGG (
112
)
2.3
0.0023
P8 GC+1d culture
TCTGTCGGGG
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
GGGGGGGGGG (
112
)
7
0.007
P8 GC+SHH+1d culture
CCCTGCTGCA (
4
)
3.5
0.0035
P8 GC+SHH+1d culture
CTGGTGGAAG
(
4
)
1.2
0.0012
P8 GC+SHH+1d culture
TCTGTCGGGG
(
2
)
1.2
0.0012
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
3T3 fibroblasts
CCCTGCTGCA (
4
)
7
0.007
3T3 fibroblasts
TCTGTCGGGG
(
2
)
7
0.007
3T3 fibroblasts
CTGGTGGAAG
(
4
)
3.5
0.0035
3T3 fibroblasts
GGGGGGGGGG (
112
)
3.5
0.0035
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
E15 cortex
CCCTGCTGCA (
4
)
9.9
0.0099
E15 cortex
TCTGTCGGGG
(
2
)
9.9
0.0099
E15 cortex
GGGGGGGGGG (
112
)
4.9
0.0049
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
P1 cortex
CTGGTGGAAG
(
4
)
4.5
0.0045
P1 cortex
TCTGTCGGGG
(
2
)
4.5
0.0045
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
CCCTGCTGCA (
4
)
3.6
0.0036
Hypothalamus
GGGGGGGGGG (
112
)
1.8
0.0018
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
CCCTGCTGCA (
4
)
7.5
0.0075
E12.5 retina
CTGGTGGAAG
(
4
)
1.9
0.0019
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
CCCTGCTGCA (
4
)
5.5
0.0055
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E16.5 retina
CCCTGCTGCA (
4
)
5.4
0.0054
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
E18.5 retina
CCCTGCTGCA (
4
)
5.5
0.0055
E18.5 retina
CTGGTGGAAG
(
4
)
1.8
0.0018
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P0.5 retina
CCCTGCTGCA (
4
)
2
0.002
P0.5 retina
TCTGTCGGGG
(
2
)
2
0.002
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
GGGGGGGGGG (
112
)
7
0.007
P2.5 retina
CCCTGCTGCA (
4
)
1.8
0.0018
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
GGGGGGGGGG (
112
)
9.9
0.0099
P4.5 retina
CCCTGCTGCA (
4
)
2
0.002
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P6.5 retina
CCCTGCTGCA (
4
)
3.3
0.0033
P6.5 retina
GGGGGGGGGG (
112
)
3.3
0.0033
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx- retina
CCCTGCTGCA (
4
)
5.6
0.0056
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
P10.5 crx+ retina
GGGGGGGGGG (
112
)
9.6
0.0096
P10.5 crx+ retina
CCCTGCTGCA (
4
)
7.7
0.0077
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
Adult retinal
GGGGGGGGGG (
112
)
3.7
0.0037
Adult retinal
CCCTGCTGCA (
4
)
1.9
0.0019
Adult retinal
TCTGTCGGGG
(
2
)
1.9
0.0019
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
CCCTGCTGCA (
4
)
1.9
0.0019
ONL
GGGGGGGGGG (
112
)
1.9
0.0019
