Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.145488	D4Ertd100e	DNA segment, Chr 4, ERATO Doi 100, expressed	4	4 61.0 cM	52213
Mm.145488	Yars	tyrosyl-tRNA synthetase	4		107271
Gene Ontology	apoptosis | ATP binding | cell motility | cytoplasm | extracellular space | interleukin-8 receptor binding | ligase activity | nucleic acid binding | protein biosynthesis | RNA binding | signal transducer activity | soluble fraction | tRNA aminoacylation for protein translation | tRNA binding | tRNA ligase activity | tyrosine-tRNA ligase activity | tyrosyl-tRNA aminoacylation
Human Homolog	YARS[tyrosyl-tRNA synthetase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 51 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACAAAGCTGT (3) 1.6 0.0016 P8 Cb GC GGGGTTTTCC (4) 1.6 0.0016 Cb medulloblastoma ACAAAGCTGT (3) 4.6 0.0046 Cb medulloblastoma ATTTGAAAAA (2) 2.3 0.0023 Cb medulloblastoma GGGGTTTTCC (4) 2.3 0.0023 P8 GC+1d culture GGGGTTTTCC (4) 5.7 0.0057 P8 GC+1d culture ACAAAGCTGT (3) 3.4 0.0034 P8 GC+1d culture GGGTTTTCCC (3) 2.3 0.0023 P8 GC+SHH+1d culture GGGTTTTCCC (3) 4.7 0.0047 P8 GC+SHH+1d culture ACAAAGCTGT (3) 3.5 0.0035 P8 GC+SHH+1d culture GGGGTTTTCC (4) 2.3 0.0023 P8 GC+SHH+1d culture ATTTGAAAAA (2) 1.2 0.0012 3T3 fibroblasts GGGTTTTCCC (3) 3.5 0.0035 E15 cortex GGGTTTTCCC (3) 9.9 0.0099 E15 cortex GGGGTTTTCC (4) 4.9 0.0049 P1 cortex ACAAAGCTGT (3) 4.5 0.0045 Hypothalamus GGGTTTTCCC (3) 5.4 0.0054 Hypothalamus ACAAAGCTGT (3) 1.8 0.0018 Hypothalamus ATTTGAAAAA (2) 1.8 0.0018 Hypothalamus GGGGTTTTCC (4) 1.8 0.0018 E12.5 retina GAAACTTGGG (3) 3.8 0.0038 E12.5 retina GGGGTTTTCC (4) 1.9 0.0019 E12.5 retina GGGTTTTCCC (3) 1.9 0.0019 E14.5 retina ACAAAGCTGT (3) 5.5 0.0055 E14.5 retina GGGGTTTTCC (4) 5.5 0.0055 E14.5 retina ATTTGAAAAA (2) 1.8 0.0018 E14.5 retina GAAACTTGGG (3) 1.8 0.0018 E14.5 retina GGGTTTTCCC (3) 1.8 0.0018 E16.5 retina GGGGTTTTCC (4) 1.8 0.0018 E18.5 retina GGGTTTTCCC (3) 5.5 0.0055 E18.5 retina GGGGTTTTCC (4) 3.6 0.0036 P0.5 retina GGGTTTTCCC (3) 3.9 0.0039 P2.5 retina GGGGTTTTCC (4) 10.6 0.0106 P2.5 retina GAAACTTGGG (3) 1.8 0.0018 P2.5 retina GGGTTTTCCC (3) 1.8 0.0018 P4.5 retina GGGGTTTTCC (4) 2 0.002 P4.5 retina GGGTTTTCCC (3) 2 0.002 P6.5 retina ATTTGAAAAA (2) 1.7 0.0017 P6.5 retina GGGGTTTTCC (4) 1.7 0.0017 P10.5 crx- retina ACAAAGCTGT (3) 1.9 0.0019 P10.5 crx- retina GGGGTTTTCC (4) 1.9 0.0019 P10.5 crx- retina GGGTTTTCCC (3) 1.9 0.0019 P10.5 crx+ retina ATTTGAAAAA (2) 3.8 0.0038 P10.5 crx+ retina GGGGTTTTCC (4) 1.9 0.0019 P10.5 crx+ retina GGGTTTTCCC (3) 1.9 0.0019 Adult retinal GGGTTTTCCC (3) 5.6 0.0056 Adult retinal ACAAAGCTGT (3) 3.7 0.0037 Adult retinal GAAACTTGGG (3) 3.7 0.0037 Adult retinal GGGGTTTTCC (4) 1.9 0.0019 ONL ACAAAGCTGT (3) 3.8 0.0038 ONL GGGGTTTTCC (4) 3.8 0.0038