Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.1465
5830404H04Rik
RIKEN cDNA 5830404H04 gene
16
207781
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 53 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGAAAAAAAA (
69
)
8.2
0.0082
P8 Cb GC
TTTTTTTTTT (
433
)
4.9
0.0049
P8 Cb GC
TCAGTGATGA (
2
)
1.6
0.0016
Cb medulloblastoma
GGAAAAAAAA (
69
)
41.6
0.0416
Cb medulloblastoma
TTTTTTTTTT (
433
)
2.3
0.0023
P8 GC+1d culture
TTTTTTTTTT (
433
)
13.7
0.0137
P8 GC+1d culture
GGAAAAAAAA (
69
)
5.7
0.0057
P8 GC+SHH+1d culture
GGAAAAAAAA (
69
)
7
0.007
P8 GC+SHH+1d culture
TTTTTTTTTT (
433
)
5.9
0.0059
E15 cortex
GGAAAAAAAA (
69
)
9.9
0.0099
E15 cortex
TGTGTACACA (
3
)
4.9
0.0049
E15 cortex
TTTTTTTTTT (
433
)
4.9
0.0049
P1 cortex
GGAAAAAAAA (
69
)
4.5
0.0045
P1 cortex
TTTTTTTTTT (
433
)
4.5
0.0045
Hypothalamus
GGAAAAAAAA (
69
)
14.5
0.0145
Hypothalamus
TTTTTTTTTT (
433
)
7.2
0.0072
E12.5 retina
TTTTTTTTTT (
433
)
7.5
0.0075
E12.5 retina
GCTTCAAAGA (
4
)
1.9
0.0019
E12.5 retina
GGAAAAAAAA (
69
)
1.9
0.0019
E14.5 retina
TTTTTTTTTT (
433
)
23.7
0.0237
E14.5 retina
GGAAAAAAAA (
69
)
10.9
0.0109
E16.5 retina
TTTTTTTTTT (
433
)
5.4
0.0054
E16.5 retina
TGTGTACACA (
3
)
3.6
0.0036
E16.5 retina
GGAAAAAAAA (
69
)
1.8
0.0018
E16.5 retina
TCAGTGATGA (
2
)
1.8
0.0018
E18.5 retina
GGAAAAAAAA (
69
)
16.4
0.0164
E18.5 retina
TTTTTTTTTT (
433
)
10.9
0.0109
E18.5 retina
TGTGTACACA (
3
)
3.6
0.0036
E18.5 retina
GGAAAAAAAT
(
11
)
1.8
0.0018
P0.5 retina
GGAAAAAAAA (
69
)
13.7
0.0137
P0.5 retina
TTTTTTTTTT (
433
)
9.8
0.0098
P2.5 retina
GGAAAAAAAA (
69
)
7
0.007
P2.5 retina
TTTTTTTTTT (
433
)
7
0.007
P2.5 retina
GCTTCAAAGA (
4
)
1.8
0.0018
P2.5 retina
GGAAAAAAAT
(
11
)
1.8
0.0018
P4.5 retina
GGAAAAAAAA (
69
)
13.9
0.0139
P4.5 retina
TTTTTTTTTT (
433
)
9.9
0.0099
P4.5 retina
TGTGTACACA (
3
)
5.9
0.0059
P4.5 retina
TCAGTGATGA (
2
)
2
0.002
P6.5 retina
GGAAAAAAAA (
69
)
13.3
0.0133
P6.5 retina
TTTTTTTTTT (
433
)
8.3
0.0083
P6.5 retina
GGAAAAAAAT
(
11
)
1.7
0.0017
P10.5 crx- retina
GGAAAAAAAA (
69
)
3.7
0.0037
P10.5 crx+ retina
GGAAAAAAAA (
69
)
15.4
0.0154
P10.5 crx+ retina
TTTTTTTTTT (
433
)
3.8
0.0038
P10.5 crx+ retina
TGTGTACACA (
3
)
1.9
0.0019
Adult retinal
TTTTTTTTTT (
433
)
7.4
0.0074
Adult retinal
GGAAAAAAAA (
69
)
5.6
0.0056
Adult retinal
TCAGTGATGA (
2
)
1.9
0.0019
ONL
GGAAAAAAAA (
69
)
17.2
0.0172
ONL
GCTTCAAAGA (
4
)
7.7
0.0077
ONL
TTTTTTTTTT (
433
)
3.8
0.0038
ONL
GGAAAAAAAT
(
11
)
1.9
0.0019
