Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.146779
B230202K19Rik
RIKEN cDNA B230202K19 gene
5
78602
Mm.146779
4933430H06Rik
RIKEN cDNA 4933430H06 gene
5
71308
Mm.146779
2410137F16Rik
RIKEN cDNA 2410137F16 gene
5
76798
Mm.146779
1500001A10Rik
RIKEN cDNA 1500001A10 gene
5
68955
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 49 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCTTACTTAA
(
6
)
3.3
0.0033
P8 Cb GC
GAGACAAAGG
(
9
)
1.6
0.0016
P8 Cb GC
GGAGAAAAAA
(
15
)
1.6
0.0016
P8 Cb GC
GTATTTACAG
(
4
)
1.6
0.0016
Cb medulloblastoma
GGAGAAAAAA
(
15
)
9.2
0.0092
Cb medulloblastoma
GAGACAAGGC
(
5
)
2.3
0.0023
P8 GC+1d culture
GCTTACTTAA
(
6
)
2.3
0.0023
P8 GC+1d culture
AGGTCTTGGG
(
5
)
1.1
0.0011
P8 GC+1d culture
CTGGGATCTA
(
6
)
1.1
0.0011
P8 GC+SHH+1d culture
GAGACAAAGG
(
9
)
2.3
0.0023
P8 GC+SHH+1d culture
GCTTACTTAA
(
6
)
2.3
0.0023
P8 GC+SHH+1d culture
GTATTTACAG
(
4
)
2.3
0.0023
P8 GC+SHH+1d culture
AGGTCTTGGG
(
5
)
1.2
0.0012
P8 GC+SHH+1d culture
CTGGGATCTA
(
6
)
1.2
0.0012
P8 GC+SHH+1d culture
GGAGAAAAAA
(
15
)
1.2
0.0012
E15 cortex
AGGTCTTGGG
(
5
)
4.9
0.0049
Hypothalamus
GAGACAAGGC
(
5
)
7.2
0.0072
Hypothalamus
GAGACAAAGG
(
9
)
1.8
0.0018
E12.5 retina
GTATTTACAG
(
4
)
3.8
0.0038
E14.5 retina
CTGGGATCTA
(
6
)
7.3
0.0073
E14.5 retina
GTAAATGAGA
(
4
)
5.5
0.0055
E16.5 retina
CTGGGATCTA
(
6
)
5.4
0.0054
E16.5 retina
GCTTACTTAA
(
6
)
1.8
0.0018
E18.5 retina
GCTTACTTAA
(
6
)
3.6
0.0036
E18.5 retina
CTGGGATCTA
(
6
)
1.8
0.0018
E18.5 retina
GTATTTACAG
(
4
)
1.8
0.0018
P0.5 retina
CTGGGATCTA
(
6
)
5.9
0.0059
P0.5 retina
GCTTACTTAA
(
6
)
2
0.002
P0.5 retina
GTATTTACAG
(
4
)
2
0.002
P2.5 retina
GTATTTACAG
(
4
)
3.5
0.0035
P2.5 retina
AGGTCTTGGG
(
5
)
1.8
0.0018
P2.5 retina
GAGACAAAGG
(
9
)
1.8
0.0018
P2.5 retina
GGAGAAAAAA
(
15
)
1.8
0.0018
P4.5 retina
AGGTCTTGGG
(
5
)
2
0.002
P6.5 retina
AGGTCTTGGG
(
5
)
3.3
0.0033
P6.5 retina
GTATTTACAG
(
4
)
3.3
0.0033
P6.5 retina
GAGACAAAGG
(
9
)
1.7
0.0017
P6.5 retina
GCTTACTTAA
(
6
)
1.7
0.0017
P6.5 retina
GGAGAAAAAA
(
15
)
1.7
0.0017
P10.5 crx- retina
GAGACAAGGC
(
5
)
1.9
0.0019
P10.5 crx- retina
GCTTACTTAA
(
6
)
1.9
0.0019
P10.5 crx+ retina
GTATTTACAG
(
4
)
3.8
0.0038
P10.5 crx+ retina
GAGACAAGGC
(
5
)
1.9
0.0019
Adult retinal
GAGACAAAGG
(
9
)
1.9
0.0019
Adult retinal
GAGACAAGGC
(
5
)
1.9
0.0019
Adult retinal
GGAGAAAAAA
(
15
)
1.9
0.0019
Adult retinal
GTATTTACAG
(
4
)
1.9
0.0019
ONL
GAGACAAAGG
(
9
)
1.9
0.0019
ONL
GTATTTACAG
(
4
)
1.9
0.0019
