Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.146984	Psmf1	proteasome (prosome, macropain) inhibitor subunit 1	2		228769
Gene Ontology	cytosol
Human Homolog	PSMF1[proteasome (prosome, macropain) inhibitor subunit 1 (PI31)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 80 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TACCTGTGAA (4) TGGTTGCAGG TTGCCAGTCA 18 0.018 Cb medulloblastoma AGACTCCCAG (3) TACCTGTGAA (4) TGTGTGCAAG (3) TTGCCAGTCA 16.1 0.0161 P8 GC+1d culture TACCTGTGAA (4) TGTGTGCAAG (3) TTGCCAGTCA 10.3 0.0103 P8 GC+SHH+1d culture AGACTCCCAG (3) CAGAGACAAG TACCTGTGAA (4) TGTGTGCAAG (3) TTGCCAGTCA 16.5 0.0165 3T3 fibroblasts CAGAGACAAG TTGCCAGTCA 7 0.007 E15 cortex GATGCTTGGA TTGCCAGTCA 19.7 0.0197 P1 cortex AGAAGGTGGT AGACTCCCAG (3) CCAGAAGGGG GATGCTTGGA 22.6 0.0226 Hypothalamus AGACTCCCAG (3) CAGAGACAAG TGTGTGCAAG (3) TTGCCAGTCA 19.9 0.0199 E12.5 retina GATGCTTGGA GGTCCAGCCA TACCTGTGAA (4) TGTGTGCAAG (3) TTGCCAGTCA 28.3 0.0283 E14.5 retina AGAAGGTGGT GGTCCAGCCA TACCTGTGAA (4) TTGCCAGTCA 16.4 0.0164 E16.5 retina GGTCCAGCCA TACCTGTGAA (4) TTGCCAGTCA 9 0.009 E18.5 retina TACCTGTGAA (4) TTGCCAGTCA 7.3 0.0073 P0.5 retina CCAGAAGGGG GGTCCAGCCA TACCTGTGAA (4) TGTGTGCAAG (3) TTGCCAGTCA 21.7 0.0217 P2.5 retina GATGCTTGGA GGTCCAGCCA TACCTGTGAA (4) TGTGTGCAAG (3) TTGCCAGTCA 28.2 0.0282 P4.5 retina CCAGAAGGGG GGTCCAGCCA TACCTGTGAA (4) TTGCCAGTCA TTGCCAGTCT 19.9 0.0199 P6.5 retina CCAGAAGGGG GATGCTTGGA TACCTGTGAA (4) TGTGTGCAAG (3) TTGCCAGTCA 13.5 0.0135 P10.5 crx- retina AGACTCCCAG (3) CAGAGACAAG TTGCCAGTCA 7.5 0.0075 P10.5 crx+ retina AGAAGGTGGT CCAGAAGGGG GGTCCAGCCA TACCTGTGAA (4) TGTGTGCAAG (3) TTGCCAGTCA 28.8 0.0288 Adult retinal AGACTCCCAG (3) CAGAGACAAG CCAGAAGGGG TACCTGTGAA (4) TGGTTGCAGG TTGCCAGTCA TTGCCAGTCT 13.3 0.0133 ONL TGGTTGCAGG TGTGTGCAAG (3) TTGCCAGTCA 11.4 0.0114