Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.14768
Rex3
reduced expression 3
X
X 57.5 cM
19716
Gene Ontology
cytoplasm
|
nucleus
|
protein binding
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 92 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCCTGAGTCC (
3
)
88.1
0.0881
P8 Cb GC
GGAAGATGCT (
3
)
65.3
0.0653
P8 Cb GC
GGAAGATCCG
(
4
)
13.1
0.0131
P8 Cb GC
GAGAATGACC
(
7
)
1.6
0.0016
P8 Cb GC
GGGAAGATCC (
3
)
1.6
0.0016
Cb medulloblastoma
GGAAGATGCT (
3
)
97.1
0.0971
Cb medulloblastoma
GGAAGATCCG
(
4
)
32.4
0.0324
Cb medulloblastoma
CCCTGAGTCC (
3
)
4.6
0.0046
Cb medulloblastoma
GAAACTCTGG (
3
)
2.3
0.0023
P8 GC+1d culture
CCCTGAGTCC (
3
)
79.9
0.0799
P8 GC+1d culture
GGAAGATGCT (
3
)
50.2
0.0502
P8 GC+1d culture
GGGAAGATCC (
3
)
6.8
0.0068
P8 GC+1d culture
GGAAGATCCG
(
4
)
4.6
0.0046
P8 GC+1d culture
GAGAAGCTGA (
7
)
1.1
0.0011
P8 GC+1d culture
GGGACCCCTG
(
7
)
1.1
0.0011
P8 GC+SHH+1d culture
GGAAGATGCT (
3
)
71.4
0.0714
P8 GC+SHH+1d culture
CCCTGAGTCC (
3
)
65.6
0.0656
P8 GC+SHH+1d culture
GGAAGATCCG
(
4
)
15.2
0.0152
P8 GC+SHH+1d culture
GGGAAGATCC (
3
)
4.7
0.0047
P8 GC+SHH+1d culture
GAGAATGACC
(
7
)
2.3
0.0023
3T3 fibroblasts
CCCTGAGTCC (
3
)
385.5
0.3855
3T3 fibroblasts
GGGAAGATCC (
3
)
3.5
0.0035
E15 cortex
CCCTGAGTCC (
3
)
197.9
0.1979
E15 cortex
GGAAGATCCG
(
4
)
14.8
0.0148
E15 cortex
GAGAATGACC
(
7
)
9.9
0.0099
E15 cortex
GGAAGATGCT (
3
)
9.9
0.0099
E15 cortex
GGGAAGATCC (
3
)
9.9
0.0099
P1 cortex
CCCTGAGTCC (
3
)
113.6
0.1136
P1 cortex
GGAAGATGCT (
3
)
36.4
0.0364
P1 cortex
GGAAGATCCG
(
4
)
9.1
0.0091
P1 cortex
GAGAAGCTGA (
7
)
4.5
0.0045
Hypothalamus
GGAAGATGCT (
3
)
123.2
0.1232
Hypothalamus
GGAAGATCCG
(
4
)
39.8
0.0398
Hypothalamus
GGGAAGATCC (
3
)
7.2
0.0072
Hypothalamus
CCCTGAGTCC (
3
)
5.4
0.0054
Hypothalamus
GGGACCCCTG
(
7
)
5.4
0.0054
Hypothalamus
GAGAATGACC
(
7
)
3.6
0.0036
Hypothalamus
GAGAAGCTGA (
7
)
1.8
0.0018
Hypothalamus
GGAAAGATCC (
2
)
1.8
0.0018
E12.5 retina
CCCTGAGTCC (
3
)
43.2
0.0432
E12.5 retina
GGAAGATGCT (
3
)
39.4
0.0394
E12.5 retina
GGAAGATCCG
(
4
)
16.9
0.0169
E12.5 retina
GGGAAGATCC (
3
)
5.6
0.0056
E12.5 retina
GAGAATGACC
(
7
)
1.9
0.0019
E14.5 retina
GGAAGATGCT (
3
)
32.8
0.0328
E14.5 retina
GGAAGATCCG
(
4
)
20
0.02
E14.5 retina
CCCTGAGTCC (
3
)
1.8
0.0018
E14.5 retina
GGAAAGATCC (
2
)
1.8
0.0018
E16.5 retina
GGAAGATGCT (
3
)
18.1
0.0181
E16.5 retina
GGAAGATCCG
(
4
)
14.5
0.0145
E16.5 retina
CCCTGAGTCC (
3
)
10.9
0.0109
E16.5 retina
GAAACTCTGG (
3
)
1.8
0.0018
E18.5 retina
GGAAGATGCT (
3
)
85.5
0.0855
E18.5 retina
GGAAGATCCG
(
4
)
27.3
0.0273
E18.5 retina
CCCTGAGTCC (
3
)
16.4
0.0164
E18.5 retina
GAGAATGACC
(
7
)
1.8
0.0018
P0.5 retina
GGAAGATGCT (
3
)
45.1
0.0451
P0.5 retina
CCCTGAGTCC (
3
)
25.5
0.0255
P0.5 retina
GGAAGATCCG
(
4
)
23.6
0.0236
P0.5 retina
GGGAAGATCC (
3
)
9.8
0.0098
P2.5 retina
GGAAGATGCT (
3
)
38.7
0.0387
P2.5 retina
CCCTGAGTCC (
3
)
22.9
0.0229
P2.5 retina
GGAAGATCCG
(
4
)
12.3
0.0123
P2.5 retina
GGGAAGATCC (
3
)
1.8
0.0018
P2.5 retina
GGGACCTCTG
(
4
)
1.8
0.0018
P4.5 retina
GGAAGATGCT (
3
)
71.3
0.0713
P4.5 retina
GGAAGATCCG
(
4
)
19.8
0.0198
P4.5 retina
CCCTGAGTCC (
3
)
11.9
0.0119
P4.5 retina
GGGAAGATCC (
3
)
4
0.004
P4.5 retina
GGGACCCCTG
(
7
)
2
0.002
P4.5 retina
GGGACCTCTG
(
4
)
2
0.002
P6.5 retina
GGAAGATGCT (
3
)
36.7
0.0367
P6.5 retina
CCCTGAGTCC (
3
)
23.3
0.0233
P6.5 retina
GGAAGATCCG
(
4
)
11.7
0.0117
P6.5 retina
GGGACCTCTG
(
4
)
1.7
0.0017
P10.5 crx- retina
GGAAGATGCT (
3
)
37.2
0.0372
P10.5 crx- retina
GGAAGATCCG
(
4
)
20.4
0.0204
P10.5 crx- retina
CCCTGAGTCC (
3
)
14.9
0.0149
P10.5 crx- retina
GGGAAGATCC (
3
)
3.7
0.0037
P10.5 crx- retina
GGGACCCCTG
(
7
)
1.9
0.0019
P10.5 crx+ retina
GGAAGATGCT (
3
)
65.4
0.0654
P10.5 crx+ retina
GGAAGATCCG
(
4
)
17.3
0.0173
P10.5 crx+ retina
CCCTGAGTCC (
3
)
11.5
0.0115
P10.5 crx+ retina
GAGAAGCTGA (
7
)
1.9
0.0019
Adult retinal
GGAAGATGCT (
3
)
27.8
0.0278
Adult retinal
GGAAGATCCG
(
4
)
13
0.013
Adult retinal
CCCTGAGTCC (
3
)
7.4
0.0074
Adult retinal
GAGAATGACC
(
7
)
1.9
0.0019
Adult retinal
GGGAAGATCC (
3
)
1.9
0.0019
ONL
CCCTGAGTCC (
3
)
15.3
0.0153
ONL
GGAAGATGCT (
3
)
9.6
0.0096
ONL
GGGAAGATCC (
3
)
3.8
0.0038
