Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.148039	Ggps1	geranylgeranyl diphosphate synthase 1	13	13 8.0 cM	14593
Gene Ontology	geranyltranstransferase activity | isoprenoid biosynthesis | transferase activity
Human Homolog	GGPS1[geranylgeranyl diphosphate synthase 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 34 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGTAATGCCA CCATTTGGTC TACTACTTGG 6.5 0.0065 Cb medulloblastoma AGTAGCTGAG TACTACTTGG 4.6 0.0046 P8 GC+1d culture TACTACTTGG 1.1 0.0011 P8 GC+SHH+1d culture AGTAATGCCA TACTACTTGG 4.7 0.0047 E15 cortex AGTAATGCCA 9.9 0.0099 Hypothalamus AGTAGCTGAG TACTACTTGG 5.4 0.0054 E12.5 retina AGTAATGCCA CCTGGCAAAG 5.7 0.0057 E14.5 retina AGTAATGCCA AGTAGCTGAG CCATTTGGTC TACTACTTGG 10.8 0.0108 E16.5 retina CCATTTGGTC 1.8 0.0018 P0.5 retina AGTAGCTGAG TACTACTTGG 4 0.004 P2.5 retina TACTACTTGG 5.3 0.0053 P4.5 retina CCTGGCAAAG TACTACTTGG 9.9 0.0099 P6.5 retina TACTACTTGG 6.7 0.0067 P10.5 crx- retina AGTAATGCCA AGTAGCTGAG CCTGGCAAAG TACTACTTGG 16.8 0.0168 P10.5 crx+ retina AGTAGCTGAG TACTACTTGG 7.6 0.0076 Adult retinal AGTAGCTGAG TACTACTTGG 9.3 0.0093 ONL AGTAATGCCA TACTACTTGG 3.8 0.0038