Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.148877	Recc1	replication factor C 1	5	5 C (5 39.0 cM)	19687
Gene Ontology	ATP binding | DNA binding | DNA replication | DNA replication factor C complex | intracellular | nucleotide binding | nucleus | regulation of transcription, DNA-dependent
Human Homolog	RFC1[replication factor C (activator 1) 1, 145kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 11 In Situ Hybridization Images

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SAGE Tags

Total 47 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAGATGTGT 3.3 0.0033 P8 Cb GC ATCAAGAAAA (7) 1.6 0.0016 P8 Cb GC GCCTTTGGTG (9) 1.6 0.0016 P8 Cb GC GTAGTTATTT 1.6 0.0016 Cb medulloblastoma AAAGATGTGT 4.6 0.0046 Cb medulloblastoma ACTCAGTTTC (2) 2.3 0.0023 P8 GC+1d culture AAAGATGTGT 2.3 0.0023 P8 GC+1d culture ACTCAGTTTC (2) 1.1 0.0011 P8 GC+SHH+1d culture AAAGATGTGT 5.9 0.0059 P8 GC+SHH+1d culture ATCAAGAAAA (7) 1.2 0.0012 P8 GC+SHH+1d culture CCACACACAC (6) 1.2 0.0012 P8 GC+SHH+1d culture GCCTTGTTGG (2) 1.2 0.0012 P8 GC+SHH+1d culture GTAGTTATTT 1.2 0.0012 3T3 fibroblasts GGCCGCGACA (2) 7 0.007 3T3 fibroblasts ATCAAGCAGA (3) 3.5 0.0035 3T3 fibroblasts GCCTTGTTGG (2) 3.5 0.0035 E15 cortex GGCCGCGACA (2) 9.9 0.0099 Hypothalamus AAAGATGTGT 3.6 0.0036 Hypothalamus ATCAAGAAAA (7) 3.6 0.0036 Hypothalamus ATCAAGCAGA (3) 1.8 0.0018 E12.5 retina AAAGATGTGT 5.6 0.0056 E12.5 retina ATCAAGCAGA (3) 1.9 0.0019 E12.5 retina GTAGTTATTT 1.9 0.0019 E14.5 retina AAAGATGTGT 5.5 0.0055 E14.5 retina GTAGTTATTT 3.6 0.0036 E14.5 retina ATCAAGAAAA (7) 1.8 0.0018 E14.5 retina GCCTTTGGTG (9) 1.8 0.0018 E16.5 retina AAAGATGTGT 3.6 0.0036 E16.5 retina ACTCAGTTTC (2) 1.8 0.0018 E16.5 retina ATCAAGAAAA (7) 1.8 0.0018 E16.5 retina ATCAAGCAGA (3) 1.8 0.0018 E18.5 retina ATCAAGAAAA (7) 1.8 0.0018 P0.5 retina GCCTTTGGTG (9) 2 0.002 P2.5 retina ATCAAGCAGA (3) 1.8 0.0018 P2.5 retina GCCTTTGGTG (9) 1.8 0.0018 P4.5 retina GCCTTGTTGG (2) 2 0.002 P6.5 retina ATCAAGCAGA (3) 1.7 0.0017 P6.5 retina CCACACACAC (6) 1.7 0.0017 P6.5 retina GCCTTTGGTG (9) 1.7 0.0017 P10.5 crx- retina CCACACACAC (6) 1.9 0.0019 P10.5 crx+ retina AAAGATGTGT 1.9 0.0019 P10.5 crx+ retina ATCAAGAAAA (7) 1.9 0.0019 Adult retinal ACTCAGTTTC (2) 1.9 0.0019 Adult retinal GCCTTGTTGG (2) 1.9 0.0019 ONL GCCTTGTTGG (2) 3.8 0.0038 ONL ACTCAGTTTC (2) 1.9 0.0019 ONL CCACACACAC (6) 1.9 0.0019