Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.148973	D530015H24Rik	RIKEN cDNA D530015H24 gene	13		78715
Mm.148973	7530408C15Rik	RIKEN cDNA 7530408C15 gene	13		320987
Mm.148973	Hnrpa0	heterogeneous nuclear ribonucleoprotein A0	13		77134
Gene Ontology	ribonucleoprotein complex | viral nucleocapsid
Human Homolog	HNRPA0[heterogeneous nuclear ribonucleoprotein A0]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 120 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAATAGAATT (3) 50.6 0.0506 P8 Cb GC CCTGGAATTT (4) 37.5 0.0375 P8 Cb GC TCAAGATGAT (3) 17.9 0.0179 P8 Cb GC GGATCCAAGT (4) 13.1 0.0131 P8 Cb GC GCCGCGTCGC (3) 4.9 0.0049 P8 Cb GC GTGTCACACG (3) 1.6 0.0016 P8 Cb GC TGTTCTCATT (3) 1.6 0.0016 Cb medulloblastoma CAATAGAATT (3) 20.8 0.0208 Cb medulloblastoma CCTGGAATTT (4) 6.9 0.0069 Cb medulloblastoma TCTAACATTT (3) 2.3 0.0023 P8 GC+1d culture CCTGGAATTT (4) 30.8 0.0308 P8 GC+1d culture CAATAGAATT (3) 29.7 0.0297 P8 GC+1d culture TCAAGATGAT (3) 6.8 0.0068 P8 GC+1d culture GGATCCAAGT (4) 4.6 0.0046 P8 GC+1d culture TCTAACATTT (3) 3.4 0.0034 P8 GC+1d culture GCCGCGTCGC (3) 2.3 0.0023 P8 GC+1d culture TGTTCTCATT (3) 2.3 0.0023 P8 GC+1d culture TTCAAATCTC (4) 2.3 0.0023 P8 GC+1d culture GTGTCACACG (3) 1.1 0.0011 P8 GC+1d culture TAAACTGCTA (3) 1.1 0.0011 P8 GC+1d culture TACTGTGTAG (4) 1.1 0.0011 P8 GC+SHH+1d culture CCTGGAATTT (4) 38.6 0.0386 P8 GC+SHH+1d culture CAATAGAATT (3) 25.8 0.0258 P8 GC+SHH+1d culture TCAAGATGAT (3) 11.7 0.0117 P8 GC+SHH+1d culture GCCGCGTCGC (3) 5.9 0.0059 P8 GC+SHH+1d culture GGATCCAAGT (4) 5.9 0.0059 P8 GC+SHH+1d culture TCTAACATTT (3) 2.3 0.0023 P8 GC+SHH+1d culture TACGGTCAAA (3) 1.2 0.0012 P8 GC+SHH+1d culture TACTGTGTAG (4) 1.2 0.0012 P8 GC+SHH+1d culture TGTTCTCATT (3) 1.2 0.0012 P8 GC+SHH+1d culture TTCAAATCTC (4) 1.2 0.0012 3T3 fibroblasts GCCGCGTCGC (3) 31.5 0.0315 3T3 fibroblasts CCTGGAATTT (4) 3.5 0.0035 3T3 fibroblasts GGATCCAAGT (4) 3.5 0.0035 E15 cortex CCTGGAATTT (4) 54.4 0.0544 E15 cortex CAATAGAATT (3) 39.6 0.0396 E15 cortex TCAAGATGAT (3) 4.9 0.0049 P1 cortex CAATAGAATT (3) 18.2 0.0182 P1 cortex TCAAGATGAT (3) 13.6 0.0136 P1 cortex CCTGGAATTT (4) 9.1 0.0091 Hypothalamus CAATAGAATT (3) 3.6 0.0036 Hypothalamus CCTGGAATTT (4) 3.6 0.0036 Hypothalamus TCTAACATTT (3) 1.8 0.0018 Hypothalamus TGTTCTCATT (3) 1.8 0.0018 E12.5 retina CAATAGAATT (3) 28.2 0.0282 E12.5 retina CCTGGAATTT (4) 24.4 0.0244 E12.5 retina GGATCCAAGT (4) 20.7 0.0207 E12.5 retina TCAAGATGAT (3) 20.7 0.0207 E12.5 retina TGTTCTCATT (3) 5.6 0.0056 E12.5 retina GCCGCGTCGC (3) 3.8 0.0038 E12.5 retina TACGGTCAAA (3) 1.9 0.0019 E12.5 retina TACTGTGTAG (4) 1.9 0.0019 E12.5 retina TCTAACATTT (3) 1.9 0.0019 E14.5 retina CCTGGAATTT (4) 40.1 0.0401 E14.5 retina CAATAGAATT (3) 31 0.031 E14.5 retina GGATCCAAGT (4) 16.4 0.0164 E14.5 retina TCAAGATGAT (3) 5.5 0.0055 E16.5 retina CAATAGAATT (3) 32.6 0.0326 E16.5 retina CCTGGAATTT (4) 25.4 0.0254 E16.5 retina GGATCCAAGT (4) 12.7 0.0127 E16.5 retina TCAAGATGAT (3) 7.2 0.0072 E16.5 retina TGTTCTCATT (3) 5.4 0.0054 E18.5 retina CCTGGAATTT (4) 43.7 0.0437 E18.5 retina CAATAGAATT (3) 25.5 0.0255 E18.5 retina GGATCCAAGT (4) 12.7 0.0127 E18.5 retina TCAAGATGAT (3) 5.5 0.0055 E18.5 retina GCCGCGTCGC (3) 3.6 0.0036 E18.5 retina TACTGTGTAG (4) 3.6 0.0036 E18.5 retina GTGTCACACG (3) 1.8 0.0018 E18.5 retina TAAACTGCTA (3) 1.8 0.0018 E18.5 retina TACGGTCAAA (3) 1.8 0.0018 P0.5 retina CCTGGAATTT (4) 27.5 0.0275 P0.5 retina CAATAGAATT (3) 21.6 0.0216 P0.5 retina GCCGCGTCGC (3) 9.8 0.0098 P0.5 retina TCTAACATTT (3) 3.9 0.0039 P0.5 retina GGATCCAAGT (4) 2 0.002 P0.5 retina GTGTCACACG (3) 2 0.002 P0.5 retina TACTGTGTAG (4) 2 0.002 P0.5 retina TGTTCTCATT (3) 2 0.002 P2.5 retina CCTGGAATTT (4) 45.8 0.0458 P2.5 retina CAATAGAATT (3) 37 0.037 P2.5 retina GGATCCAAGT (4) 19.4 0.0194 P2.5 retina TCAAGATGAT (3) 8.8 0.0088 P2.5 retina TGTTCTCATT (3) 8.8 0.0088 P2.5 retina TTCAAATCTC (4) 5.3 0.0053 P2.5 retina TACTGTGTAG (4) 3.5 0.0035 P2.5 retina GCCGCGTCGC (3) 1.8 0.0018 P4.5 retina CCTGGAATTT (4) 43.6 0.0436 P4.5 retina CAATAGAATT (3) 25.8 0.0258 P4.5 retina GGATCCAAGT (4) 7.9 0.0079 P4.5 retina TCTAACATTT (3) 5.9 0.0059 P4.5 retina TGTTCTCATT (3) 4 0.004 P4.5 retina TTCAAATCTC (4) 2 0.002 P6.5 retina CCTGGAATTT (4) 20 0.02 P6.5 retina CAATAGAATT (3) 15 0.015 P6.5 retina GGATCCAAGT (4) 5 0.005 P6.5 retina TCAAGATGAT (3) 5 0.005 P6.5 retina GCCGCGTCGC (3) 1.7 0.0017 P6.5 retina GTGTCACACG (3) 1.7 0.0017 P6.5 retina TACTGTGTAG (4) 1.7 0.0017 P6.5 retina TCTAACATTT (3) 1.7 0.0017 P6.5 retina TTCAAATCTC (4) 1.7 0.0017 P10.5 crx- retina CAATAGAATT (3) 14.9 0.0149 P10.5 crx- retina CCTGGAATTT (4) 13 0.013 P10.5 crx- retina GGATCCAAGT (4) 5.6 0.0056 P10.5 crx- retina TAAACTGCTA (3) 3.7 0.0037 P10.5 crx- retina TCAAGATGAT (3) 1.9 0.0019 P10.5 crx+ retina CCTGGAATTT (4) 13.5 0.0135 P10.5 crx+ retina TCAAGATGAT (3) 9.6 0.0096 P10.5 crx+ retina CAATAGAATT (3) 5.8 0.0058 P10.5 crx+ retina GGATCCAAGT (4) 3.8 0.0038 Adult retinal CAATAGAATT (3) 7.4 0.0074 Adult retinal CCTGGAATTT (4) 7.4 0.0074 ONL CCTGGAATTT (4) 9.6 0.0096 ONL CAATAGAATT (3) 5.7 0.0057 ONL GGATCCAAGT (4) 3.8 0.0038 ONL GCCGCGTCGC (3) 1.9 0.0019 ONL TAAACTGCTA (3) 1.9 0.0019 ONL TACTGTGTAG (4) 1.9 0.0019 ONL TCAAGATGAT (3) 1.9 0.0019