Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.150977
1500002O20Rik
RIKEN cDNA 1500002O20 gene
7
71997
Human Homolog
FLJ12886[hypothetical protein FLJ12886]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 54 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGGAAGCCAG (
6
)
13.1
0.0131
P8 Cb GC
TCACTGCTGT
(
3
)
1.6
0.0016
Cb medulloblastoma
TCACTGCTGT
(
3
)
13.9
0.0139
Cb medulloblastoma
GGGAAGCCAG (
6
)
6.9
0.0069
Cb medulloblastoma
AGACTGAGGG (
2
)
2.3
0.0023
P8 GC+1d culture
GGGAAGCCAG (
6
)
10.3
0.0103
P8 GC+1d culture
CAGGGAACTG
(
3
)
2.3
0.0023
P8 GC+1d culture
TCACTGCTGT
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
GGGAAGCCAG (
6
)
10.5
0.0105
P8 GC+SHH+1d culture
CAGGGAACTG
(
3
)
2.3
0.0023
P8 GC+SHH+1d culture
TCACTGCTGT
(
3
)
2.3
0.0023
P8 GC+SHH+1d culture
AGACTGAGGG (
2
)
1.2
0.0012
3T3 fibroblasts
GGGAAGCCAG (
6
)
10.5
0.0105
3T3 fibroblasts
CTGCTGCTCC
(
4
)
3.5
0.0035
E15 cortex
GGGAAGCCAG (
6
)
9.9
0.0099
E15 cortex
CTGCTGCTCC
(
4
)
4.9
0.0049
E15 cortex
TCACTGCTGT
(
3
)
4.9
0.0049
P1 cortex
GGGAAGCCAG (
6
)
18.2
0.0182
Hypothalamus
TCACTGCTGT
(
3
)
5.4
0.0054
Hypothalamus
CAGGGAACTG
(
3
)
3.6
0.0036
Hypothalamus
GGGAAGCCAG (
6
)
3.6
0.0036
E12.5 retina
GGGAAGCCAG (
6
)
9.4
0.0094
E12.5 retina
TCACTGCTGT
(
3
)
3.8
0.0038
E12.5 retina
AGACTGAGGG (
2
)
1.9
0.0019
E14.5 retina
GGGAAGCCAG (
6
)
20
0.02
E16.5 retina
GGGAAGCCAG (
6
)
27.2
0.0272
E18.5 retina
GGGAAGCCAG (
6
)
10.9
0.0109
E18.5 retina
CAGGGAACTG
(
3
)
1.8
0.0018
P0.5 retina
GGGAAGCCAG (
6
)
7.9
0.0079
P0.5 retina
AGACTGAGGG (
2
)
2
0.002
P0.5 retina
CCCTCCCTCA (
5
)
2
0.002
P0.5 retina
CTGCTGCTCC
(
4
)
2
0.002
P2.5 retina
GGGAAGCCAG (
6
)
15.8
0.0158
P2.5 retina
CAGGGAACTG
(
3
)
1.8
0.0018
P4.5 retina
GGGAAGCCAG (
6
)
11.9
0.0119
P4.5 retina
CAGGGAACTG
(
3
)
2
0.002
P4.5 retina
CCCTCCCTCA (
5
)
2
0.002
P6.5 retina
GGGAAGCCAG (
6
)
15
0.015
P6.5 retina
TCACAGACAA
(
4
)
5
0.005
P6.5 retina
TCACTGCTGT
(
3
)
5
0.005
P10.5 crx- retina
GGGAAGCCAG (
6
)
14.9
0.0149
P10.5 crx- retina
CAGGGAACTG
(
3
)
1.9
0.0019
P10.5 crx- retina
TCACTGCTGT
(
3
)
1.9
0.0019
P10.5 crx+ retina
GGGAAGCCAG (
6
)
19.2
0.0192
P10.5 crx+ retina
CCCTCCCTCA (
5
)
3.8
0.0038
P10.5 crx+ retina
GGCACCTACA
(
3
)
1.9
0.0019
P10.5 crx+ retina
TCACAGACAA
(
4
)
1.9
0.0019
P10.5 crx+ retina
TCACTGCTGT
(
3
)
1.9
0.0019
Adult retinal
GGGAAGCCAG (
6
)
11.1
0.0111
Adult retinal
GGCACCTACA
(
3
)
3.7
0.0037
Adult retinal
CCCTCCCTCA (
5
)
1.9
0.0019
ONL
GGCACCTACA
(
3
)
3.8
0.0038
ONL
GGGAAGCCAG (
6
)
3.8
0.0038
ONL
CCCTCCCTCA (
5
)
1.9
0.0019
