Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1517	Sybl1	synaptobrevin like 1	X	X 0.5 cM	20955
Gene Ontology	apical part of cell | endoplasmic reticulum | Golgi apparatus | integral to membrane | intracellular protein transport | protein transport | protein transporter activity | transport
Human Homolog	SYBL1[synaptobrevin-like 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 40 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAAAAAAAAA (157) 47.3 0.0473 P8 Cb GC CTTTAGGGTT 3.3 0.0033 Cb medulloblastoma CAAAAAAAAA (157) 92.5 0.0925 Cb medulloblastoma CTTTAGGGTT 4.6 0.0046 P8 GC+1d culture CAAAAAAAAA (157) 37.7 0.0377 P8 GC+SHH+1d culture CAAAAAAAAA (157) 58.5 0.0585 P8 GC+SHH+1d culture GCATTTCTCT 3.5 0.0035 P8 GC+SHH+1d culture CTACCTGCTT 1.2 0.0012 P8 GC+SHH+1d culture CTTTAGGGTT 1.2 0.0012 3T3 fibroblasts CTACCTGCTT 3.5 0.0035 E15 cortex CAAAAAAAAA (157) 34.6 0.0346 E15 cortex GCATTTCTCT 4.9 0.0049 E15 cortex GCCAAACTGT 4.9 0.0049 P1 cortex CAAAAAAAAA (157) 22.7 0.0227 Hypothalamus CAAAAAAAAA (157) 39.8 0.0398 Hypothalamus AGAAAGGGCA (5) 3.6 0.0036 Hypothalamus GCCAAACTGT 3.6 0.0036 Hypothalamus CTTTAGGGTT 1.8 0.0018 E12.5 retina CAAAAAAAAA (157) 22.5 0.0225 E14.5 retina CAAAAAAAAA (157) 9.1 0.0091 E14.5 retina CTTTAGGGTT 1.8 0.0018 E16.5 retina CAAAAAAAAA (157) 9.1 0.0091 E16.5 retina CTTTAGGGTT 3.6 0.0036 E16.5 retina GCATTTCTCT 1.8 0.0018 E18.5 retina CAAAAAAAAA (157) 41.8 0.0418 P0.5 retina CAAAAAAAAA (157) 137.4 0.1374 P0.5 retina AGAAAGGGCA (5) 2 0.002 P2.5 retina CAAAAAAAAA (157) 52.8 0.0528 P2.5 retina CTTTAGGGTT 1.8 0.0018 P4.5 retina CAAAAAAAAA (157) 41.6 0.0416 P4.5 retina CTACCTGCTT 2 0.002 P6.5 retina CAAAAAAAAA (157) 31.7 0.0317 P10.5 crx- retina CAAAAAAAAA (157) 13 0.013 P10.5 crx- retina AGAAAGGGCA (5) 1.9 0.0019 P10.5 crx+ retina CAAAAAAAAA (157) 32.7 0.0327 P10.5 crx+ retina CTACCTGCTT 1.9 0.0019 P10.5 crx+ retina CTTTAGGGTT 1.9 0.0019 Adult retinal CAAAAAAAAA (157) 20.4 0.0204 Adult retinal GCATTTCTCT 1.9 0.0019 ONL CAAAAAAAAA (157) 17.2 0.0172