Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.152466	4930548G07Rik	RIKEN cDNA 4930548G07 gene	14		75339
Gene Ontology	chromatin | chromatin assembly/disassembly | chromatin binding | DNA binding | nucleus | regulation of transcription, DNA-dependent | transcription factor activity
Human Homolog	HSMPP8[M-phase phosphoprotein, mpp8]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 49 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCCTCCCCTG (7) 3.3 0.0033 P8 Cb GC AAGTGCGAGG (2) 1.6 0.0016 P8 Cb GC CCTGAGTGCT (4) 1.6 0.0016 P8 Cb GC TACATAAAAT (14) 1.6 0.0016 Cb medulloblastoma CAGTGTACAA (2) 2.3 0.0023 Cb medulloblastoma CCTGAGTGCT (4) 2.3 0.0023 P8 GC+1d culture TACATAAAAT (14) 2.3 0.0023 P8 GC+1d culture AAGTGCGAGG (2) 1.1 0.0011 P8 GC+1d culture CAGTGTACAA (2) 1.1 0.0011 P8 GC+1d culture GCCTCCCCTG (7) 1.1 0.0011 P8 GC+1d culture GTTAAGTCAG (2) 1.1 0.0011 P8 GC+SHH+1d culture AAGTGCGAGG (2) 3.5 0.0035 P8 GC+SHH+1d culture TACATAAAAT (14) 3.5 0.0035 P8 GC+SHH+1d culture AAATAAATAG (3) 1.2 0.0012 P8 GC+SHH+1d culture CAGTGTACAA (2) 1.2 0.0012 3T3 fibroblasts GCCTCCCCTG (7) 14 0.014 3T3 fibroblasts GTTAAGTCAG (2) 3.5 0.0035 3T3 fibroblasts TACATAAAAT (14) 3.5 0.0035 E15 cortex CCTGAGTGCT (4) 9.9 0.0099 E15 cortex AAGTGCGAGG (2) 4.9 0.0049 E15 cortex TACATAAAAT (14) 4.9 0.0049 P1 cortex GCCTCCCCTG (7) 4.5 0.0045 Hypothalamus TACATAAAAT (14) 1.8 0.0018 E12.5 retina GTTAAGTCAG (2) 5.6 0.0056 E12.5 retina CAGTGTACAA (2) 3.8 0.0038 E12.5 retina TACATAAAAT (14) 3.8 0.0038 E12.5 retina AAATAAATAG (3) 1.9 0.0019 E14.5 retina TACATAAAAT (14) 7.3 0.0073 E16.5 retina TACATAAAAT (14) 3.6 0.0036 E16.5 retina GCCTCCCCTG (7) 1.8 0.0018 E16.5 retina GTTAAGTCAG (2) 1.8 0.0018 E18.5 retina TACATAAAAT (14) 12.7 0.0127 E18.5 retina CCTGAGTGCT (4) 1.8 0.0018 P0.5 retina GCCTCCCCTG (7) 3.9 0.0039 P2.5 retina TACATAAAAT (14) 3.5 0.0035 P4.5 retina TACATAAAAT (14) 7.9 0.0079 P4.5 retina CCTGAGTGCT (4) 5.9 0.0059 P4.5 retina CAGTGTACAA (2) 2 0.002 P6.5 retina TACATAAAAT (14) 1.7 0.0017 P10.5 crx- retina GCCTCCCCTG (7) 5.6 0.0056 P10.5 crx- retina TACATAAAAT (14) 3.7 0.0037 P10.5 crx- retina AAATAAATAG (3) 1.9 0.0019 P10.5 crx- retina CAGTGTACAA (2) 1.9 0.0019 P10.5 crx+ retina GCCTCCCCTG (7) 5.8 0.0058 P10.5 crx+ retina TACATAAAAT (14) 5.8 0.0058 Adult retinal CAGTGTACAA (2) 1.9 0.0019 Adult retinal GCCTCCCCTG (7) 1.9 0.0019 ONL CCTGAGTGCT (4) 3.8 0.0038 ONL TACATAAAAT (14) 1.9 0.0019