Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.152941	Usp16	ubiquitin specific protease 16	16		74112
Gene Ontology	peptidase activity
Human Homolog	USP16[ubiquitin specific protease 16]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 88 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATTTTTTTTC (2) CAGATGAGGC (4) CCTTTAATCC (3) TGCAAGCTGT TTTGCACCAA (2) 60.3 0.0603 Cb medulloblastoma ATTTTTTTTC (2) CAGATGAGGC (4) CCTTTAATCC (3) GACTCTGCTT GGGAAGAAAA (3) GTGTTGCCAG (2) GTTTAAAAAA (2) TTTACACCAA 76.1 0.0761 P8 GC+1d culture ATTTTTTTTC (2) CCTTTAATCC (3) GTGTTGCCAG (2) TTTATTATTT (4) TTTGCACCAA (2) 41.1 0.0411 P8 GC+SHH+1d culture ATTTTTTTTC (2) CCTTTAATCC (3) GTTTAAAAAA (2) TGCAAGCTGT TTTATTATTT (4) TTTGCACCAA (2) 35.3 0.0353 3T3 fibroblasts CCTTTAATCC (3) TGCAAGCTGT TTTGCACCAA (2) 77.1 0.0771 E15 cortex ATTTTTTTTC (2) CCTTTAATCC (3) 59.3 0.0593 P1 cortex ATTTTTTTTC (2) CCTTTAATCC (3) TTTATTATTT (4) 204.5 0.2045 Hypothalamus ATTTTTTTTC (2) CCTTTAATCC (3) GGGAAGAAAA (3) TTTATTATTT (4) 30.7 0.0307 E12.5 retina ATTTTTTTTC (2) CCTTTAATCC (3) 84.5 0.0845 E14.5 retina ATTTTTTTTC (2) CCTTTAATCC (3) GTGTTGCCAG (2) GTTTAAAAAA (2) TTTATTATTT (4) 133 0.133 E16.5 retina ATTTTTTTTC (2) CCTTTAATCC (3) GTGTTGCCAG (2) TTTACACCAA TTTATTATTT (4) 85.1 0.0851 E18.5 retina ATTTTTTTTC (2) CAGATGAGGC (4) CCTTTAATCC (3) GTTTAAAAAA (2) TGCAAGCTGT TTTATTATTT (4) 39.9 0.0399 P0.5 retina ATTTTTTTTC (2) CCTTTAATCC (3) GACTCTGCTT TTTACACCAA 80.5 0.0805 P2.5 retina ATTTTTTTTC (2) CCTTTAATCC (3) GTTTAAAAAA (2) TTTACACCAA TTTATTATTT (4) 96.8 0.0968 P4.5 retina ATTTTTTTTC (2) CCTTTAATCC (3) TTTATTATTT (4) 51.5 0.0515 P6.5 retina ATTTTTTTTC (2) CCTTTAATCC (3) GTGTTGCCAG (2) TTTACACCAA TTTATTATTT (4) TTTGCACCAA (2) 85.1 0.0851 P10.5 crx- retina CCTTTAATCC (3) GACTCTGCTT GTGTTGCCAG (2) TTTACACCAA TTTGCACCAA (2) 76.3 0.0763 P10.5 crx+ retina ATTTTTTTTC (2) CCTTTAATCC (3) TGCAAGCTGT TTTATTATTT (4) 46 0.046 Adult retinal ATTTTTTTTC (2) CCTTTAATCC (3) TTTATTATTT (4) 133.4 0.1334 ONL ATTTTTTTTC (2) CCTTTAATCC (3) GACTCTGCTT TTTATTATTT (4) 91.9 0.0919