Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.153039	B930003D11Rik	RIKEN cDNA B930003D11 gene	4		100052
Mm.153039	Mpdz	multiple PDZ domain protein	4	4 38.6 cM	17475
Gene Ontology	cell adhesion | protein binding | tight junction
Human Homolog	MPDZ[multiple PDZ domain protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 52 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGGCTCAAA (13) 9.8 0.0098 Cb medulloblastoma GTGGCTCAAA (13) 6.9 0.0069 P8 GC+1d culture GTGGCTCAAA (13) 13.7 0.0137 P8 GC+1d culture TGGGCCACAC (6) 4.6 0.0046 P8 GC+1d culture GCTGGAGGAG (9) 1.1 0.0011 P8 GC+SHH+1d culture GTGGCTCAAA (13) 7 0.007 P8 GC+SHH+1d culture TGGGCCACAC (6) 3.5 0.0035 P8 GC+SHH+1d culture CCTTTAGTTT (7) 2.3 0.0023 P8 GC+SHH+1d culture TGGGAGGCAG (6) 1.2 0.0012 3T3 fibroblasts GTGGCTCAAA (13) 10.5 0.0105 3T3 fibroblasts TGGGAGGCAG (6) 3.5 0.0035 E15 cortex GTGGCTCAAA (13) 19.8 0.0198 E15 cortex TGGGCCACAC (6) 4.9 0.0049 P1 cortex GTGGCTCAAA (13) 18.2 0.0182 Hypothalamus GTGGCTCAAA (13) 5.4 0.0054 Hypothalamus CTATTGTTTT (2) 1.8 0.0018 Hypothalamus GCTGGAGGAG (9) 1.8 0.0018 E12.5 retina GTGGCTCAAA (13) 11.3 0.0113 E12.5 retina TGGGCCACAC (6) 3.8 0.0038 E12.5 retina CTATTGTTTT (2) 1.9 0.0019 E14.5 retina GTGGCTCAAA (13) 18.2 0.0182 E14.5 retina TGGGAGGCAG (6) 1.8 0.0018 E16.5 retina GTGGCTCAAA (13) 9.1 0.0091 E16.5 retina TGGGCCACAC (6) 3.6 0.0036 E16.5 retina GGAGACAGAG (6) 1.8 0.0018 E18.5 retina GTGGCTCAAA (13) 5.5 0.0055 E18.5 retina TGGGCCACAC (6) 3.6 0.0036 P0.5 retina GTGGCTCAAA (13) 17.7 0.0177 P0.5 retina TGGGAGGCAG (6) 2 0.002 P2.5 retina GTGGCTCAAA (13) 10.6 0.0106 P2.5 retina CCTTTAGTTT (7) 1.8 0.0018 P2.5 retina CTATTGTTTT (2) 1.8 0.0018 P2.5 retina GGAGACAGAG (6) 1.8 0.0018 P4.5 retina GTGGCTCAAA (13) 7.9 0.0079 P4.5 retina TGGGCCACAC (6) 4 0.004 P4.5 retina CCTTTAGTTT (7) 2 0.002 P6.5 retina GTGGCTCAAA (13) 11.7 0.0117 P6.5 retina TGGGCCACAC (6) 3.3 0.0033 P6.5 retina GGAGACAGAG (6) 1.7 0.0017 P10.5 crx- retina GCTGGAGGAG (9) 3.7 0.0037 P10.5 crx- retina GTGGCTCAAA (13) 3.7 0.0037 P10.5 crx- retina CCTTTAGTTT (7) 1.9 0.0019 P10.5 crx- retina TGGGCCACAC (6) 1.9 0.0019 P10.5 crx+ retina GTGGCTCAAA (13) 7.7 0.0077 P10.5 crx+ retina GGAGACAGAG (6) 1.9 0.0019 P10.5 crx+ retina TGGGCCACAC (6) 1.9 0.0019 Adult retinal CTATTGTTTT (2) 3.7 0.0037 Adult retinal TGGGCCACAC (6) 3.7 0.0037 Adult retinal GTGGCTCAAA (13) 1.9 0.0019 ONL GTGGCTCAAA (13) 5.7 0.0057 ONL CTATTGTTTT (2) 1.9 0.0019 ONL GGAGACAGAG (6) 1.9 0.0019