Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.153159	Cct6a	chaperonin subunit 6a (zeta)	5		12466
Gene Ontology	ATP binding | protein folding
Human Homolog	CCT6A[chaperonin containing TCP1, subunit 6A (zeta 1)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 64 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CGAGCTGGGA GAGCTCGGCA (3) TAAGATCCTT TTGTCTAAAA (3) TTGTCTACCC (2) TTTCTCCTCT 47.4 0.0474 Cb medulloblastoma TAAGATCCTT TTGTCTAAAA (3) 23.1 0.0231 P8 GC+1d culture CTTATCTTAT GAGCTCGGCA (3) TAAGATCCTT TTGTCTAAAA (3) 27.3 0.0273 P8 GC+SHH+1d culture TAAGATCCTT TTGTCTAAAA (3) TTGTCTACCC (2) TTTCTCCTCT 32.8 0.0328 3T3 fibroblasts CTTATCTTAT TAAGATCCTT 10.5 0.0105 E15 cortex CCTGTAAGCC (2) GAGCTCGGCA (3) TAAGATCCTT TTTCTCCTCT 24.6 0.0246 P1 cortex AAAGATCCTT CCTGTAAGCC (2) TAAGATCCTT TTGTCTAAAA (3) 27.1 0.0271 Hypothalamus CCTGTAAGCC (2) TAAGATCCTT 10.9 0.0109 E12.5 retina CTTATCTTAT TAAGATCCTT 45.1 0.0451 E14.5 retina TAAGATCCTT TTGTCTAAAA (3) TTGTCTACCC (2) 23.6 0.0236 E16.5 retina CCTGTAAGCC (2) TAAGATCCTT 16.3 0.0163 E18.5 retina CCTGTAAGCC (2) TAAGATCCTT TTGTCTAAAA (3) 27.3 0.0273 P0.5 retina AAAGATCCTT TAAGATCCTT TTTCTCCTCT 21.7 0.0217 P2.5 retina CCTGTAAGCC (2) TAAGATCCTT 29.9 0.0299 P4.5 retina CCTGTAAGCC (2) TAAGATCCTT 23.8 0.0238 P6.5 retina CCTGTAAGCC (2) CGAGCTGGGA CTTATCTTAT TAAGATCCTT TTTCTCCTCT 36.8 0.0368 P10.5 crx- retina CCTGTAAGCC (2) TAAGATCCTT 13 0.013 P10.5 crx+ retina CCTGTAAGCC (2) CGAGCTGGGA CTTATCTTAT TAAGATCCTT TTGTCTACCC (2) 42.2 0.0422 Adult retinal CCTGTAAGCC (2) CGAGCTGGGA TAAGATCCTT 24.2 0.0242 ONL AAAGATCCTT CGAGCTGGGA GAGCTCGGCA (3) TAAGATCCTT 24.8 0.0248