Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.153230	AI481521	expressed sequence AI481521	5		100684
Mm.153230	AW743152	expressed sequence AW743152	5		101016
Mm.153230	AW822227	expressed sequence AW822227	5		101019
Mm.153230	D630030B08Rik	RIKEN cDNA D630030B08 gene	5		319941
Mm.153230	Atp8a1	ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1	5		11980
Gene Ontology	ATP binding | ATPase activity | ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | catalytic activity | cation transport | hydrolase activity | hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | integral to membrane | magnesium ion binding | membrane | metabolism
Human Homolog	ATP8A1[ATPase, aminophospholipid transporter (APLT), Class I, type 8A, member 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 79 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAATAAACTT (8) 3.3 0.0033 P8 Cb GC AGCGTGACTT (5) 1.6 0.0016 P8 Cb GC ATACTTTTCA (7) 1.6 0.0016 Cb medulloblastoma AAATAAACTT (8) 11.6 0.0116 Cb medulloblastoma GGGAGAAAAA (11) 4.6 0.0046 Cb medulloblastoma AATTCGCCTG (5) 2.3 0.0023 Cb medulloblastoma AGCGTGACTT (5) 2.3 0.0023 Cb medulloblastoma AGTGCTTTGT (7) 2.3 0.0023 Cb medulloblastoma TGGGTGTTGG (8) 2.3 0.0023 Cb medulloblastoma TTTTAAACTG (9) 2.3 0.0023 P8 GC+1d culture TTTTAAACTG (9) 4.6 0.0046 P8 GC+1d culture GTGTGAATGA (7) 3.4 0.0034 P8 GC+1d culture AAATAAACTT (8) 2.3 0.0023 P8 GC+1d culture AATTCGGCTG (6) 2.3 0.0023 P8 GC+1d culture ATACTTTTCA (7) 2.3 0.0023 P8 GC+1d culture GGGAGAAAAA (11) 2.3 0.0023 P8 GC+1d culture TCTGAAAAGT (6) 2.3 0.0023 P8 GC+SHH+1d culture AAATAAACTT (8) 3.5 0.0035 P8 GC+SHH+1d culture GTGAGCAAGT (8) 2.3 0.0023 P8 GC+SHH+1d culture TTTTAAACTG (9) 2.3 0.0023 P8 GC+SHH+1d culture AGTGCTTTGT (7) 1.2 0.0012 P8 GC+SHH+1d culture GGGAGAAAAA (11) 1.2 0.0012 P8 GC+SHH+1d culture GTGTGAATGA (7) 1.2 0.0012 P8 GC+SHH+1d culture TGGGTGTTGG (8) 1.2 0.0012 P8 GC+SHH+1d culture TTTTCCTTTT (11) 1.2 0.0012 3T3 fibroblasts TGGGTGTTGG (8) 3.5 0.0035 E15 cortex AATTCGCCTG (5) 4.9 0.0049 P1 cortex GTGAGCAAGT (8) 4.5 0.0045 P1 cortex GTGTGAATGA (7) 4.5 0.0045 Hypothalamus AAATAAACTT (8) 7.2 0.0072 Hypothalamus AGCGTGACTT (5) 3.6 0.0036 Hypothalamus GTGAGCAAGT (8) 3.6 0.0036 Hypothalamus GTGTGAATGA (7) 1.8 0.0018 Hypothalamus TTTTAAACTG (9) 1.8 0.0018 E12.5 retina AAATAAACTT (8) 5.6 0.0056 E12.5 retina AATTCGCCTG (5) 1.9 0.0019 E12.5 retina AGCCAGCAGT (8) 1.9 0.0019 E12.5 retina GGGAGAAAAA (11) 1.9 0.0019 E12.5 retina GTGAGCAAGT (8) 1.9 0.0019 E12.5 retina TGGGTGTTGG (8) 1.9 0.0019 E12.5 retina TTTTCCTTTT (11) 1.9 0.0019 E14.5 retina AAATAAACTT (8) 1.8 0.0018 E14.5 retina AGCGTCTGCA (15) 1.8 0.0018 E14.5 retina GGGAGAAAAA (11) 1.8 0.0018 E16.5 retina TTTTAAACTG (9) 3.6 0.0036 E16.5 retina AAATAAACTT (8) 1.8 0.0018 E16.5 retina GGGAGAAAAA (11) 1.8 0.0018 E16.5 retina TCTGAAAAGT (6) 1.8 0.0018 E16.5 retina TGGGTGTTGG (8) 1.8 0.0018 E18.5 retina AAATAAACTT (8) 7.3 0.0073 E18.5 retina TGGGTGTTGG (8) 1.8 0.0018 P0.5 retina AATTCGGCTG (6) 2 0.002 P2.5 retina AGCCAGCAGT (8) 3.5 0.0035 P2.5 retina AAATAAACTT (8) 1.8 0.0018 P2.5 retina TGGGTGTTGG (8) 1.8 0.0018 P2.5 retina TTTTCCTTTT (11) 1.8 0.0018 P4.5 retina AAATAAACTT (8) 4 0.004 P4.5 retina GTGTGAATGA (7) 4 0.004 P6.5 retina AAATAAACTT (8) 5 0.005 P6.5 retina TTTTAAACTG (9) 3.3 0.0033 P6.5 retina AGCGTCTGCA (15) 1.7 0.0017 P6.5 retina TCTGAAAAGT (6) 1.7 0.0017 P10.5 crx- retina AAATAAACTT (8) 5.6 0.0056 P10.5 crx- retina AATTCGGCTG (6) 3.7 0.0037 P10.5 crx- retina GTGAGCAAGT (8) 1.9 0.0019 P10.5 crx- retina TTTTCCTTTT (11) 1.9 0.0019 P10.5 crx+ retina AGCGTCTGCA (15) 13.5 0.0135 P10.5 crx+ retina AAATAAACTT (8) 5.8 0.0058 P10.5 crx+ retina GTGAGCAAGT (8) 1.9 0.0019 P10.5 crx+ retina TCTGAAAAGT (6) 1.9 0.0019 P10.5 crx+ retina TTTTAAACTG (9) 1.9 0.0019 Adult retinal AGCGTCTGCA (15) 42.6 0.0426 Adult retinal AGCCAGCAGT (8) 5.6 0.0056 Adult retinal AGTGCTTTGT (7) 1.9 0.0019 ONL AGCGTCTGCA (15) 67 0.067 ONL TTTTAAACTG (9) 5.7 0.0057 ONL AAATAAACTT (8) 1.9 0.0019 ONL AGCCAGCAGT (8) 1.9 0.0019 ONL GGGAGAAAAA (11) 1.9 0.0019