Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.15343	4632404M16Rik	RIKEN cDNA 4632404M16 gene	3		74348
Mm.15343	Casq2	calsequestrin 2	3		12373
Gene Ontology	calcium ion binding | calcium ion storage activity | extracellular space | heart development | muscle development | regulation of muscle contraction | sarcoplasmic reticulum | smooth endoplasmic reticulum | striated muscle contraction
Human Homolog	CASQ2[calsequestrin 2 (cardiac muscle)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 33 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAAAAAAAA (204) 45.7 0.0457 P8 Cb GC TTTTGAAAAG (4) 1.6 0.0016 Cb medulloblastoma GAAAAAAAAA (204) 173.4 0.1734 Cb medulloblastoma GAGAAGACTC (5) 4.6 0.0046 P8 GC+1d culture GAAAAAAAAA (204) 41.1 0.0411 P8 GC+1d culture TTTTGAAAAG (4) 2.3 0.0023 P8 GC+SHH+1d culture GAAAAAAAAA (204) 77.3 0.0773 P8 GC+SHH+1d culture AAAAAGACTC (5) 2.3 0.0023 P8 GC+SHH+1d culture ATATTACATA (2) 1.2 0.0012 3T3 fibroblasts AAAAAGACTC (5) 3.5 0.0035 E15 cortex GAAAAAAAAA (204) 54.4 0.0544 P1 cortex GAAAAAAAAA (204) 45.5 0.0455 P1 cortex AAAAAGACTC (5) 9.1 0.0091 P1 cortex ATATTACATA (2) 4.5 0.0045 Hypothalamus GAAAAAAAAA (204) 67 0.067 Hypothalamus GAGAAGACTC (5) 3.6 0.0036 E12.5 retina GAAAAAAAAA (204) 46.9 0.0469 E12.5 retina AAAAAGACTC (5) 7.5 0.0075 E14.5 retina GAAAAAAAAA (204) 34.6 0.0346 E16.5 retina GAAAAAAAAA (204) 23.5 0.0235 E18.5 retina GAAAAAAAAA (204) 65.5 0.0655 P0.5 retina GAAAAAAAAA (204) 35.3 0.0353 P2.5 retina GAAAAAAAAA (204) 86.2 0.0862 P2.5 retina ATATTACATA (2) 1.8 0.0018 P4.5 retina GAAAAAAAAA (204) 51.5 0.0515 P4.5 retina ATATTACATA (2) 5.9 0.0059 P6.5 retina GAAAAAAAAA (204) 40 0.04 P10.5 crx- retina GAAAAAAAAA (204) 16.7 0.0167 P10.5 crx+ retina GAAAAAAAAA (204) 42.3 0.0423 Adult retinal GAAAAAAAAA (204) 16.7 0.0167 Adult retinal ATATTACATA (2) 1.9 0.0019 ONL GAAAAAAAAA (204) 24.9 0.0249 ONL TTTTGAAAAG (4) 1.9 0.0019