Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.153750
2900009C16Rik
RIKEN cDNA 2900009C16 gene
10
78400
Mm.153750
5330439J01Rik
RIKEN cDNA 5330439J01 gene
10
109205
Mm.153750
AW742410
expressed sequence AW742410
10
103491
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 50 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCTCCATCCT (
6
)
24.5
0.0245
P8 Cb GC
AAATTGGGGG (
5
)
6.5
0.0065
P8 Cb GC
TGTACTGGCA
(
4
)
3.3
0.0033
P8 Cb GC
CCATCCAGTG (
5
)
1.6
0.0016
Cb medulloblastoma
CCTCCATCCT (
6
)
9.2
0.0092
Cb medulloblastoma
ATATGCCTGC (
4
)
2.3
0.0023
Cb medulloblastoma
TGTACTGGCA
(
4
)
2.3
0.0023
P8 GC+1d culture
CCTCCATCCT (
6
)
13.7
0.0137
P8 GC+1d culture
AAATTGGGGG (
5
)
8
0.008
P8 GC+1d culture
CCATCCAGTG (
5
)
3.4
0.0034
P8 GC+1d culture
TGTACTGGCA
(
4
)
2.3
0.0023
P8 GC+SHH+1d culture
CCTCCATCCT (
6
)
21.1
0.0211
P8 GC+SHH+1d culture
TGTACTGGCA
(
4
)
4.7
0.0047
P8 GC+SHH+1d culture
CCATCCAGTG (
5
)
1.2
0.0012
3T3 fibroblasts
CCATCCAGTG (
5
)
7
0.007
3T3 fibroblasts
CCTCCATCCT (
6
)
7
0.007
E15 cortex
CCTCCATCCT (
6
)
24.7
0.0247
E15 cortex
AAATTGGGGG (
5
)
9.9
0.0099
P1 cortex
TGTACTGGCA
(
4
)
13.6
0.0136
P1 cortex
CCTCCATCCT (
6
)
9.1
0.0091
Hypothalamus
CCTCCATCCT (
6
)
5.4
0.0054
Hypothalamus
AAATTGGGGG (
5
)
1.8
0.0018
Hypothalamus
TGTACTGGCA
(
4
)
1.8
0.0018
E12.5 retina
CCTCCATCCT (
6
)
16.9
0.0169
E12.5 retina
ATATGCCTGC (
4
)
1.9
0.0019
E14.5 retina
CCTCCATCCT (
6
)
12.8
0.0128
E14.5 retina
TGTACTGGCA
(
4
)
1.8
0.0018
E16.5 retina
CCTCCATCCT (
6
)
10.9
0.0109
E16.5 retina
TGTACTGGCA
(
4
)
5.4
0.0054
E18.5 retina
CCTCCATCCT (
6
)
12.7
0.0127
E18.5 retina
TGTACTGGCA
(
4
)
5.5
0.0055
P0.5 retina
CCTCCATCCT (
6
)
13.7
0.0137
P0.5 retina
AAATTGGGGG (
5
)
2
0.002
P0.5 retina
ATATGCCTGC (
4
)
2
0.002
P0.5 retina
TGTACTGGCA
(
4
)
2
0.002
P2.5 retina
CCTCCATCCT (
6
)
14.1
0.0141
P2.5 retina
TGTACTGGCA
(
4
)
1.8
0.0018
P4.5 retina
CCTCCATCCT (
6
)
7.9
0.0079
P4.5 retina
AAATTGGGGG (
5
)
4
0.004
P4.5 retina
CCATCCAGTG (
5
)
2
0.002
P4.5 retina
TGTACTGGCA
(
4
)
2
0.002
P6.5 retina
CCTCCATCCT (
6
)
8.3
0.0083
P6.5 retina
AAATTGGGGG (
5
)
1.7
0.0017
P10.5 crx- retina
CCTCCATCCT (
6
)
11.1
0.0111
P10.5 crx- retina
TGTACTGGCA
(
4
)
3.7
0.0037
P10.5 crx+ retina
CCTCCATCCT (
6
)
15.4
0.0154
P10.5 crx+ retina
TGTACTGGCA
(
4
)
5.8
0.0058
Adult retinal
CCTCCATCCT (
6
)
5.6
0.0056
Adult retinal
CCATCCAGTG (
5
)
1.9
0.0019
ONL
AAATTGGGGG (
5
)
1.9
0.0019
