Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]

Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24


 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.153895 A930012N16RikRIKEN cDNA A930012N16 gene 2    77813 
 Mm.153895 C79248expressed sequence C79248 2    96982 
 Mm.153895 Rnpc2RNA-binding region (RNP1, RRM) containing 2 2    170791 
 Mm.153895 B330012G18RikRIKEN cDNA B330012G18 gene 2    320419 
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 295 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCTGGTTGCTGG (369)68.50.0685
P8 Cb GCCCTTTAATCC (355)52.20.0522
P8 Cb GCTTTGCTTTAA (10)32.60.0326
P8 Cb GCAGAAAAAAAA (47)17.90.0179
P8 Cb GCTGTGAATGAT (9)9.80.0098
P8 Cb GCAGCCAAATAC (5)6.50.0065
P8 Cb GCTTTTTTTTTT (433)4.90.0049
P8 Cb GCGCAGATGGTT (6)3.30.0033
P8 Cb GCTGCTACCTAG (5)3.30.0033
P8 Cb GCTTTTATTTAA (17)3.30.0033
P8 Cb GCAGAGAAAAAG (5)1.60.0016
P8 Cb GCATGTTCTTCT (7)1.60.0016
P8 Cb GCCCTTCAATCC (8)1.60.0016
P8 Cb GCGACTACAGTA (6)1.60.0016
P8 Cb GCGTTCAGCAAA (5)1.60.0016
P8 Cb GCTACATATGTG (10)1.60.0016
Cb medulloblastomaTGGTTGCTGG (369)113.30.1133
Cb medulloblastomaAGAAAAAAAA (47)53.20.0532
Cb medulloblastomaCCTTTAATCC (355)41.60.0416
Cb medulloblastomaTGTGAATGAT (9)23.10.0231
Cb medulloblastomaTTTGCTTTAA (10)6.90.0069
Cb medulloblastomaGCAGATGGTT (6)4.60.0046
Cb medulloblastomaAAGAACGTAG (6)2.30.0023
Cb medulloblastomaCCTTCAATCC (8)2.30.0023
Cb medulloblastomaGAGGAGTCAT (4)2.30.0023
Cb medulloblastomaGTAAGCAAAG (6)2.30.0023
Cb medulloblastomaTATAAATAAA (9)2.30.0023
Cb medulloblastomaTGCTACCTAG (5)2.30.0023
Cb medulloblastomaTTTTATTTAA (17)2.30.0023
Cb medulloblastomaTTTTTTTTTT (433)2.30.0023
P8 GC+1d cultureTGGTTGCTGG (369)57.10.0571
P8 GC+1d cultureCCTTTAATCC (355)320.032
P8 GC+1d cultureTTTGCTTTAA (10)19.40.0194
P8 GC+1d cultureTGTGAATGAT (9)17.10.0171
P8 GC+1d cultureTTTTTTTTTT (433)13.70.0137
P8 GC+1d cultureAGAAAAAAAA (47)80.008
P8 GC+1d cultureAGCCAAATAC (5)6.80.0068
P8 GC+1d cultureGTTCAGCAAA (5)6.80.0068
P8 GC+1d cultureGCAGATGGTT (6)5.70.0057
P8 GC+1d cultureAAATATATAT (9)4.60.0046
P8 GC+1d cultureAAGAACGTAG (6)3.40.0034
P8 GC+1d cultureTTTTATTTAA (17)3.40.0034
P8 GC+1d cultureCCTTCAATCC (8)1.10.0011
P8 GC+1d cultureGACTACAGTA (6)1.10.0011
P8 GC+1d cultureGAGGAGTCAT (4)1.10.0011
P8 GC+1d cultureTACATATGTG (10)1.10.0011
P8 GC+SHH+1d cultureTGGTTGCTGG (369)890.089
P8 GC+SHH+1d cultureTTTGCTTTAA (10)38.60.0386
P8 GC+SHH+1d cultureCCTTTAATCC (355)25.80.0258
P8 GC+SHH+1d cultureTGTGAATGAT (9)16.40.0164
P8 GC+SHH+1d cultureAGAAAAAAAA (47)14.10.0141
P8 GC+SHH+1d cultureGTTCAGCAAA (5)5.90.0059
P8 GC+SHH+1d cultureTTTTTTTTTT (433)5.90.0059
P8 GC+SHH+1d cultureAAGAACGTAG (6)4.70.0047
P8 GC+SHH+1d cultureAAATATATAT (9)3.50.0035
P8 GC+SHH+1d cultureCCTTCAATCC (8)3.50.0035
P8 GC+SHH+1d cultureGACTACAGTA (6)2.30.0023
P8 GC+SHH+1d cultureGCAGATGGTT (6)2.30.0023
P8 GC+SHH+1d cultureGTTTCAGCAA (6)2.30.0023
P8 GC+SHH+1d cultureTTTTATTTAA (17)2.30.0023
P8 GC+SHH+1d cultureATCCCTGCAT (5)1.20.0012
P8 GC+SHH+1d cultureGTAAGCAAAG (6)1.20.0012
P8 GC+SHH+1d cultureGTTTTATGGC (7)1.20.0012
3T3 fibroblastsTGGTTGCTGG (369)220.80.2208
3T3 fibroblastsCCTTTAATCC (355)70.10.0701
3T3 fibroblastsCCTTCAATCC (8)10.50.0105
3T3 fibroblastsGCAGATGGTT (6)10.50.0105
3T3 fibroblastsGTTCAGCAAA (5)10.50.0105
3T3 fibroblastsAGAAAAAAAA (47)3.50.0035
3T3 fibroblastsATCCCTGCAT (5)3.50.0035
3T3 fibroblastsCCGGGTGGTG (4)3.50.0035
3T3 fibroblastsGCTCCGCGCC (5)3.50.0035
3T3 fibroblastsGTTTCAGCAA (6)3.50.0035
3T3 fibroblastsTGCTACCTAG (5)3.50.0035
3T3 fibroblastsTTTGCTTTAA (10)3.50.0035
E15 cortexTGGTTGCTGG (369)277.10.2771
E15 cortexCCTTTAATCC (355)54.40.0544
E15 cortexAGAAAAAAAA (47)14.80.0148
E15 cortexCCGGGTGGTG (4)9.90.0099
E15 cortexAGCCAAATAC (5)4.90.0049
E15 cortexGCCTTCAATA (5)4.90.0049
E15 cortexGTTCAGCAAA (5)4.90.0049
E15 cortexTGTGAATGAT (9)4.90.0049
E15 cortexTTTTTTTTTT (433)4.90.0049
P1 cortexCCTTTAATCC (355)154.50.1545
P1 cortexTGGTTGCTGG (369)86.40.0864
P1 cortexGTTCAGCAAA (5)18.20.0182
P1 cortexTTTGCTTTAA (10)18.20.0182
P1 cortexAGAAAAAAAA (47)9.10.0091
P1 cortexGCTTCAATAT (5)9.10.0091
P1 cortexTGCTACCTAG (5)9.10.0091
P1 cortexTGTGAATGAT (9)9.10.0091
P1 cortexTTTTATTTAA (17)9.10.0091
P1 cortexAAATATATAT (9)4.50.0045
P1 cortexAAGAACGTAG (6)4.50.0045
P1 cortexAGCCAAATAC (5)4.50.0045
P1 cortexGCAGATGGTT (6)4.50.0045
P1 cortexGTTTCAGCAA (6)4.50.0045
P1 cortexTTTTTTTTTT (433)4.50.0045
HypothalamusTGGTTGCTGG (369)349.60.3496
HypothalamusAGAAAAAAAA (47)32.60.0326
HypothalamusTGTGAATGAT (9)21.70.0217
HypothalamusTTTGCTTTAA (10)21.70.0217
HypothalamusCCTTTAATCC (355)19.90.0199
HypothalamusTTTTTTTTTT (433)7.20.0072
HypothalamusAGCCAAATAC (5)1.80.0018
HypothalamusATGTTCTTCT (7)1.80.0018
HypothalamusCCTTCAATCC (8)1.80.0018
HypothalamusGTTCAGCAAA (5)1.80.0018
HypothalamusGTTTCAGCAA (6)1.80.0018
HypothalamusGTTTTATGGC (7)1.80.0018
HypothalamusTACATATGTG (10)1.80.0018
HypothalamusTTAACTGAAG (9)1.80.0018
HypothalamusTTTTATTTAA (17)1.80.0018
E12.5 retinaTGGTTGCTGG (369)157.70.1577
E12.5 retinaCCTTTAATCC (355)75.10.0751
E12.5 retinaTTTGCTTTAA (10)22.50.0225
E12.5 retinaAGAAAAAAAA (47)20.70.0207
E12.5 retinaTGTGAATGAT (9)11.30.0113
E12.5 retinaTTTTATTTAA (17)11.30.0113
E12.5 retinaAAGAACGTAG (6)9.40.0094
E12.5 retinaAGCCAAATAC (5)9.40.0094
E12.5 retinaGTTCAGCAAA (5)9.40.0094
E12.5 retinaTTTTTTTTTT (433)7.50.0075
E12.5 retinaATGAATAAAT (5)5.60.0056
E12.5 retinaGCAGATGGTT (6)3.80.0038
E12.5 retinaAAATATATAT (9)1.90.0019
E12.5 retinaAGAGAAAAAG (5)1.90.0019
E12.5 retinaCCTTCAATCC (8)1.90.0019
E12.5 retinaGACTACAGTA (6)1.90.0019
E12.5 retinaGCCTTCAATA (5)1.90.0019
E12.5 retinaGCTCCGCGCC (5)1.90.0019
E14.5 retinaTGGTTGCTGG (369)936.50.9365
E14.5 retinaCCTTTAATCC (355)120.30.1203
E14.5 retinaTTTGCTTTAA (10)43.70.0437
E14.5 retinaTTTTTTTTTT (433)23.70.0237
E14.5 retinaAGAAAAAAAA (47)200.02
E14.5 retinaAAATATATAT (9)5.50.0055
E14.5 retinaAGAGAAAAAG (5)5.50.0055
E14.5 retinaAAGAACGTAG (6)3.60.0036
E14.5 retinaGACTACAGTA (6)3.60.0036
E14.5 retinaGTTTCAGCAA (6)3.60.0036
E14.5 retinaTACATATGTG (10)3.60.0036
E14.5 retinaTGTGAATGAT (9)3.60.0036
E14.5 retinaTTTTATTTAA (17)3.60.0036
E14.5 retinaAGCCAAATAC (5)1.80.0018
E14.5 retinaCCTTCAATCC (8)1.80.0018
E14.5 retinaGCTTCAATAT (5)1.80.0018
E14.5 retinaGTTCAGCAAA (5)1.80.0018
E16.5 retinaTGGTTGCTGG (369)767.90.7679
E16.5 retinaCCTTTAATCC (355)68.80.0688
E16.5 retinaTTTGCTTTAA (10)47.10.0471
E16.5 retinaTGTGAATGAT (9)14.50.0145
E16.5 retinaAGAAAAAAAA (47)10.90.0109
E16.5 retinaTTTTTTTTTT (433)5.40.0054
E16.5 retinaGAGGAGTCAT (4)3.60.0036
E16.5 retinaGCAGATGGTT (6)3.60.0036
E16.5 retinaGCTTCAATAT (5)3.60.0036
E16.5 retinaAAGAACGTAG (6)1.80.0018
E16.5 retinaAGAGAAAAAG (5)1.80.0018
E16.5 retinaAGCCAAATAC (5)1.80.0018
E16.5 retinaATGGATAGTG (5)1.80.0018
E16.5 retinaCCTTCAATCC (8)1.80.0018
E16.5 retinaGACTACAGTA (6)1.80.0018
E16.5 retinaTGCTACCTAG (5)1.80.0018
E16.5 retinaTTAACTGAAG (9)1.80.0018
E18.5 retinaTGGTTGCTGG (369)252.80.2528
E18.5 retinaTTTGCTTTAA (10)41.80.0418
E18.5 retinaAGAAAAAAAA (47)29.10.0291
E18.5 retinaCCTTTAATCC (355)23.60.0236
E18.5 retinaTGTGAATGAT (9)14.60.0146
E18.5 retinaTTTTTTTTTT (433)10.90.0109
E18.5 retinaATGTTCTTCT (7)5.50.0055
E18.5 retinaGTTCAGCAAA (5)5.50.0055
E18.5 retinaAAATATATAT (9)3.60.0036
E18.5 retinaTTTTATTTAA (17)3.60.0036
E18.5 retinaAAGAACGTAG (6)1.80.0018
E18.5 retinaAGCCAAATAC (5)1.80.0018
E18.5 retinaCCTTCAATCC (8)1.80.0018
E18.5 retinaGACTACAGTA (6)1.80.0018
E18.5 retinaGCAGATGGTT (6)1.80.0018
E18.5 retinaTACATATGTG (10)1.80.0018
E18.5 retinaTATAAATAAA (9)1.80.0018
P0.5 retinaTGGTTGCTGG (369)190.40.1904
P0.5 retinaCCTTTAATCC (355)72.60.0726
P0.5 retinaGCAGATGGTT (6)17.70.0177
P0.5 retinaGTTCAGCAAA (5)17.70.0177
P0.5 retinaTGTGAATGAT (9)15.70.0157
P0.5 retinaTTTGCTTTAA (10)15.70.0157
P0.5 retinaAGAAAAAAAA (47)13.70.0137
P0.5 retinaTTTTTTTTTT (433)9.80.0098
P0.5 retinaAGCCAAATAC (5)7.90.0079
P0.5 retinaGACTACAGTA (6)3.90.0039
P0.5 retinaGTTTCAGCAA (6)3.90.0039
P0.5 retinaTGTTTAGGTA (4)3.90.0039
P0.5 retinaAAGAACGTAG (6)20.002
P0.5 retinaATCCCTGCAT (5)20.002
P0.5 retinaCCTTCAATCC (8)20.002
P0.5 retinaGTAAGCAAAG (6)20.002
P0.5 retinaTTTTATTTAA (17)20.002
P2.5 retinaTGGTTGCTGG (369)165.40.1654
P2.5 retinaCCTTTAATCC (355)70.40.0704
P2.5 retinaTTTGCTTTAA (10)38.70.0387
P2.5 retinaTGTGAATGAT (9)19.40.0194
P2.5 retinaAGAAAAAAAA (47)17.60.0176
P2.5 retinaGTTCAGCAAA (5)8.80.0088
P2.5 retinaGCAGATGGTT (6)70.007
P2.5 retinaTTTTTTTTTT (433)70.007
P2.5 retinaAGCCAAATAC (5)5.30.0053
P2.5 retinaGACTACAGTA (6)5.30.0053
P2.5 retinaAAGAACGTAG (6)3.50.0035
P2.5 retinaCCGGGTGGTG (4)1.80.0018
P2.5 retinaGCTTCAATAT (5)1.80.0018
P2.5 retinaTATAAATAAA (9)1.80.0018
P2.5 retinaTGTTTAGGTA (4)1.80.0018
P2.5 retinaTTTTATTTAA (17)1.80.0018
P4.5 retinaTGGTTGCTGG (369)150.60.1506
P4.5 retinaTTTGCTTTAA (10)47.60.0476
P4.5 retinaCCTTTAATCC (355)43.60.0436
P4.5 retinaAGAAAAAAAA (47)31.70.0317
P4.5 retinaTGTGAATGAT (9)27.70.0277
P4.5 retinaTTTTATTTAA (17)13.90.0139
P4.5 retinaAAGAACGTAG (6)11.90.0119
P4.5 retinaGTTCAGCAAA (5)9.90.0099
P4.5 retinaTTTTTTTTTT (433)9.90.0099
P4.5 retinaAAATATATAT (9)40.004
P4.5 retinaGTAAGCAAAG (6)20.002
P4.5 retinaTACATATGTG (10)20.002
P6.5 retinaTGGTTGCTGG (369)156.70.1567
P6.5 retinaCCTTTAATCC (355)700.07
P6.5 retinaTTTGCTTTAA (10)48.40.0484
P6.5 retinaTGTGAATGAT (9)18.30.0183
P6.5 retinaAGAAAAAAAA (47)13.30.0133
P6.5 retinaTTTTTTTTTT (433)8.30.0083
P6.5 retinaGCAGATGGTT (6)6.70.0067
P6.5 retinaGTTCAGCAAA (5)6.70.0067
P6.5 retinaTTTTATTTAA (17)6.70.0067
P6.5 retinaAAGAACGTAG (6)3.30.0033
P6.5 retinaCCTTCAATCC (8)3.30.0033
P6.5 retinaGACTACAGTA (6)1.70.0017
P6.5 retinaTACATATGTG (10)1.70.0017
P10.5 crx- retinaTGGTTGCTGG (369)280.50.2805
P10.5 crx- retinaCCTTTAATCC (355)63.20.0632
P10.5 crx- retinaTTTGCTTTAA (10)31.60.0316
P10.5 crx- retinaGTTCAGCAAA (5)16.70.0167
P10.5 crx- retinaTGTGAATGAT (9)14.90.0149
P10.5 crx- retinaGCAGATGGTT (6)11.10.0111
P10.5 crx- retinaAGAAAAAAAA (47)7.40.0074
P10.5 crx- retinaAAATATATAT (9)5.60.0056
P10.5 crx- retinaCCTTCAATCC (8)3.70.0037
P10.5 crx- retinaGAGGAGTCAT (4)3.70.0037
P10.5 crx- retinaGTTTCAGCAA (6)3.70.0037
P10.5 crx- retinaGTTTTATGGC (7)3.70.0037
P10.5 crx- retinaAGCCAAATAC (5)1.90.0019
P10.5 crx- retinaATCCCTGCAT (5)1.90.0019
P10.5 crx- retinaATGGATAGTG (5)1.90.0019
P10.5 crx- retinaTTTTATTTAA (17)1.90.0019
P10.5 crx+ retinaTGGTTGCTGG (369)101.90.1019
P10.5 crx+ retinaCCTTTAATCC (355)38.40.0384
P10.5 crx+ retinaTTTGCTTTAA (10)28.80.0288
P10.5 crx+ retinaTGTGAATGAT (9)21.10.0211
P10.5 crx+ retinaGTTCAGCAAA (5)9.60.0096
P10.5 crx+ retinaAGAAAAAAAA (47)5.80.0058
P10.5 crx+ retinaAAGAACGTAG (6)3.80.0038
P10.5 crx+ retinaGCAGATGGTT (6)3.80.0038
P10.5 crx+ retinaTTTTTTTTTT (433)3.80.0038
P10.5 crx+ retinaAAATATATAT (9)1.90.0019
P10.5 crx+ retinaAGAGAAAAAG (5)1.90.0019
P10.5 crx+ retinaCCTTCAATCC (8)1.90.0019
P10.5 crx+ retinaGACTACAGTA (6)1.90.0019
P10.5 crx+ retinaGTTTCAGCAA (6)1.90.0019
P10.5 crx+ retinaTATAAATAAA (9)1.90.0019
P10.5 crx+ retinaTTTTATTTAA (17)1.90.0019
Adult retinalTGGTTGCTGG (369)214.80.2148
Adult retinalCCTTTAATCC (355)129.60.1296
Adult retinalGTTCAGCAAA (5)14.80.0148
Adult retinalCCTTCAATCC (8)7.40.0074
Adult retinalTTTGCTTTAA (10)7.40.0074
Adult retinalTTTTTTTTTT (433)7.40.0074
Adult retinalAGAAAAAAAA (47)5.60.0056
Adult retinalTGTGAATGAT (9)5.60.0056
Adult retinalAGCCAAATAC (5)1.90.0019
Adult retinalGCCTTCAATA (5)1.90.0019
Adult retinalGTTTCAGCAA (6)1.90.0019
ONLTGGTTGCTGG (369)398.40.3984
ONLCCTTTAATCC (355)84.30.0843
ONLAGAAAAAAAA (47)19.20.0192
ONLTTTGCTTTAA (10)15.30.0153
ONLTGTGAATGAT (9)11.50.0115
ONLGCAGATGGTT (6)7.70.0077
ONLGTTCAGCAAA (5)3.80.0038
ONLTTTTTTTTTT (433)3.80.0038
ONLAGCCAAATAC (5)1.90.0019
ONLGACTACAGTA (6)1.90.0019
ONLTTAACTGAAG (9)1.90.0019