Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.153895
A930012N16Rik
RIKEN cDNA A930012N16 gene
2
77813
Mm.153895
C79248
expressed sequence C79248
2
96982
Mm.153895
Rnpc2
RNA-binding region (RNP1, RRM) containing 2
2
170791
Mm.153895
B330012G18Rik
RIKEN cDNA B330012G18 gene
2
320419
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 84 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCAGATGGTT
(
4
)
3.3
0.0033
P8 Cb GC
TGCTACCTAG
(
5
)
3.3
0.0033
P8 Cb GC
AGAGAAAAAG
(
4
)
1.6
0.0016
P8 Cb GC
GTTCAGCAAA
(
4
)
1.6
0.0016
Cb medulloblastoma
GCAGATGGTT
(
4
)
4.6
0.0046
Cb medulloblastoma
AAGAACGTAG
(
4
)
2.3
0.0023
Cb medulloblastoma
GAGGAGTCAT
(
4
)
2.3
0.0023
Cb medulloblastoma
TATAAATAAA
(
7
)
2.3
0.0023
Cb medulloblastoma
TGCTACCTAG
(
5
)
2.3
0.0023
P8 GC+1d culture
GTTCAGCAAA
(
4
)
6.8
0.0068
P8 GC+1d culture
GCAGATGGTT
(
4
)
5.7
0.0057
P8 GC+1d culture
AAGAACGTAG
(
4
)
3.4
0.0034
P8 GC+1d culture
GAGGAGTCAT
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
GTTCAGCAAA
(
4
)
5.9
0.0059
P8 GC+SHH+1d culture
AAGAACGTAG
(
4
)
4.7
0.0047
P8 GC+SHH+1d culture
GCAGATGGTT
(
4
)
2.3
0.0023
P8 GC+SHH+1d culture
GTTTTATGGC
(
5
)
1.2
0.0012
3T3 fibroblasts
GCAGATGGTT
(
4
)
10.5
0.0105
3T3 fibroblasts
GTTCAGCAAA
(
4
)
10.5
0.0105
3T3 fibroblasts
CCGGGTGGTG
(
4
)
3.5
0.0035
3T3 fibroblasts
TGCTACCTAG
(
5
)
3.5
0.0035
E15 cortex
CCGGGTGGTG
(
4
)
9.9
0.0099
E15 cortex
GCCTTCAATA
(
4
)
4.9
0.0049
E15 cortex
GTTCAGCAAA
(
4
)
4.9
0.0049
P1 cortex
GTTCAGCAAA
(
4
)
18.2
0.0182
P1 cortex
GCTTCAATAT
(
5
)
9.1
0.0091
P1 cortex
TGCTACCTAG
(
5
)
9.1
0.0091
P1 cortex
AAGAACGTAG
(
4
)
4.5
0.0045
P1 cortex
GCAGATGGTT
(
4
)
4.5
0.0045
Hypothalamus
GTTCAGCAAA
(
4
)
1.8
0.0018
Hypothalamus
GTTTTATGGC
(
5
)
1.8
0.0018
Hypothalamus
TTAACTGAAG
(
7
)
1.8
0.0018
E12.5 retina
AAGAACGTAG
(
4
)
9.4
0.0094
E12.5 retina
GTTCAGCAAA
(
4
)
9.4
0.0094
E12.5 retina
GCAGATGGTT
(
4
)
3.8
0.0038
E12.5 retina
AGAGAAAAAG
(
4
)
1.9
0.0019
E12.5 retina
GCCTTCAATA
(
4
)
1.9
0.0019
E14.5 retina
AGAGAAAAAG
(
4
)
5.5
0.0055
E14.5 retina
AAGAACGTAG
(
4
)
3.6
0.0036
E14.5 retina
GCTTCAATAT
(
5
)
1.8
0.0018
E14.5 retina
GTTCAGCAAA
(
4
)
1.8
0.0018
E16.5 retina
GAGGAGTCAT
(
4
)
3.6
0.0036
E16.5 retina
GCAGATGGTT
(
4
)
3.6
0.0036
E16.5 retina
GCTTCAATAT
(
5
)
3.6
0.0036
E16.5 retina
AAGAACGTAG
(
4
)
1.8
0.0018
E16.5 retina
AGAGAAAAAG
(
4
)
1.8
0.0018
E16.5 retina
ATGGATAGTG
(
4
)
1.8
0.0018
E16.5 retina
TGCTACCTAG
(
5
)
1.8
0.0018
E16.5 retina
TTAACTGAAG
(
7
)
1.8
0.0018
E18.5 retina
GTTCAGCAAA
(
4
)
5.5
0.0055
E18.5 retina
AAGAACGTAG
(
4
)
1.8
0.0018
E18.5 retina
GCAGATGGTT
(
4
)
1.8
0.0018
E18.5 retina
TATAAATAAA
(
7
)
1.8
0.0018
P0.5 retina
GCAGATGGTT
(
4
)
17.7
0.0177
P0.5 retina
GTTCAGCAAA
(
4
)
17.7
0.0177
P0.5 retina
TGTTTAGGTA
(
4
)
3.9
0.0039
P0.5 retina
AAGAACGTAG
(
4
)
2
0.002
P2.5 retina
GTTCAGCAAA
(
4
)
8.8
0.0088
P2.5 retina
GCAGATGGTT
(
4
)
7
0.007
P2.5 retina
AAGAACGTAG
(
4
)
3.5
0.0035
P2.5 retina
CCGGGTGGTG
(
4
)
1.8
0.0018
P2.5 retina
GCTTCAATAT
(
5
)
1.8
0.0018
P2.5 retina
TATAAATAAA
(
7
)
1.8
0.0018
P2.5 retina
TGTTTAGGTA
(
4
)
1.8
0.0018
P4.5 retina
AAGAACGTAG
(
4
)
11.9
0.0119
P4.5 retina
GTTCAGCAAA
(
4
)
9.9
0.0099
P6.5 retina
GCAGATGGTT
(
4
)
6.7
0.0067
P6.5 retina
GTTCAGCAAA
(
4
)
6.7
0.0067
P6.5 retina
AAGAACGTAG
(
4
)
3.3
0.0033
P10.5 crx- retina
GTTCAGCAAA
(
4
)
16.7
0.0167
P10.5 crx- retina
GCAGATGGTT
(
4
)
11.1
0.0111
P10.5 crx- retina
GAGGAGTCAT
(
4
)
3.7
0.0037
P10.5 crx- retina
GTTTTATGGC
(
5
)
3.7
0.0037
P10.5 crx- retina
ATGGATAGTG
(
4
)
1.9
0.0019
P10.5 crx+ retina
GTTCAGCAAA
(
4
)
9.6
0.0096
P10.5 crx+ retina
AAGAACGTAG
(
4
)
3.8
0.0038
P10.5 crx+ retina
GCAGATGGTT
(
4
)
3.8
0.0038
P10.5 crx+ retina
AGAGAAAAAG
(
4
)
1.9
0.0019
P10.5 crx+ retina
TATAAATAAA
(
7
)
1.9
0.0019
Adult retinal
GTTCAGCAAA
(
4
)
14.8
0.0148
Adult retinal
GCCTTCAATA
(
4
)
1.9
0.0019
ONL
GCAGATGGTT
(
4
)
7.7
0.0077
ONL
GTTCAGCAAA
(
4
)
3.8
0.0038
ONL
TTAACTGAAG
(
7
)
1.9
0.0019
