Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.154529
Bhlhb3
basic helix-loop-helix domain containing, class B3
6
6 74.5 cM
79362
Mm.154529
6430520M22Rik
RIKEN cDNA 6430520M22 gene
6
319716
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 31 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CAAAGTTACA (
4
)
3.3
0.0033
Cb medulloblastoma
CAAAGTTACA (
4
)
9.2
0.0092
P8 GC+1d culture
TAACCAAAGT
(
5
)
1.1
0.0011
P8 GC+1d culture
TCAGACATCA
(
3
)
1.1
0.0011
P8 GC+1d culture
TCCTTCTCCA
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
CAAAGTTACA (
4
)
3.5
0.0035
P8 GC+SHH+1d culture
TCCTTCTCCA
(
4
)
2.3
0.0023
3T3 fibroblasts
TCCTTCTCCA
(
4
)
3.5
0.0035
P1 cortex
TCCTTCTCCA
(
4
)
4.5
0.0045
Hypothalamus
CAAAGTTACA (
4
)
1.8
0.0018
Hypothalamus
TCAGACATCA
(
3
)
1.8
0.0018
Hypothalamus
TCCTTCTCCA
(
4
)
1.8
0.0018
E12.5 retina
CAAAGTTACA (
4
)
1.9
0.0019
E12.5 retina
TCCTTCTCCA
(
4
)
1.9
0.0019
E14.5 retina
CAAAGTTACA (
4
)
5.5
0.0055
E14.5 retina
TAACCAAAGT
(
5
)
1.8
0.0018
E16.5 retina
CAAAGTTACA (
4
)
3.6
0.0036
E16.5 retina
TCAGACATCA
(
3
)
1.8
0.0018
E18.5 retina
CAAAGTTACA (
4
)
1.8
0.0018
P4.5 retina
CAAAGTTACA (
4
)
2
0.002
P6.5 retina
CAAAGTTACA (
4
)
1.7
0.0017
P6.5 retina
TCCTTCTCCA
(
4
)
1.7
0.0017
P10.5 crx- retina
CAAAGTTACA (
4
)
1.9
0.0019
P10.5 crx+ retina
CAAAGTTACA (
4
)
5.8
0.0058
P10.5 crx+ retina
CTTTTACTGC
(
2
)
1.9
0.0019
P10.5 crx+ retina
TCCTTCTCCA
(
4
)
1.9
0.0019
Adult retinal
TCCTTCTCCA
(
4
)
5.6
0.0056
Adult retinal
CTTTTACTGC
(
2
)
3.7
0.0037
Adult retinal
TAACCAAAGT
(
5
)
1.9
0.0019
ONL
CAAAGTTACA (
4
)
1.9
0.0019
ONL
CTTTTACTGC
(
2
)
1.9
0.0019
