Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.15655	Lhx3	LIM homeobox protein 3	2	2 16.0 cM	16871
Gene Ontology	DNA binding | nucleus | regulation of transcription, DNA-dependent | transcription factor activity | transcription factor complex | zinc ion binding
Human Homolog	LHX3[LIM homeobox 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 19 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  Cb medulloblastoma TGACCAACTG (6) 4.6 0.0046 P8 GC+SHH+1d culture AAAATGTCAA (8) 3.5 0.0035 P8 GC+SHH+1d culture TGACCAACTG (6) 1.2 0.0012 P8 GC+SHH+1d culture TGGGTTAAAC 1.2 0.0012 P1 cortex AAAATGTCAA (8) 4.5 0.0045 Hypothalamus TGACCAACTG (6) 3.6 0.0036 E18.5 retina TGGGTTAAAC 3.6 0.0036 E18.5 retina AAAATGTCAA (8) 1.8 0.0018 P0.5 retina TGACCAACTG (6) 2 0.002 P2.5 retina AAAATGTCAA (8) 1.8 0.0018 P2.5 retina TGACCAACTG (6) 1.8 0.0018 P4.5 retina TGACCAACTG (6) 7.9 0.0079 P6.5 retina AAAATGTCAA (8) 3.3 0.0033 P6.5 retina TGGGTTAAAC 1.7 0.0017 P10.5 crx- retina AAAATGTCAA (8) 1.9 0.0019 P10.5 crx+ retina AAAATGTCAA (8) 5.8 0.0058 Adult retinal AAAATGTCAA (8) 3.7 0.0037 Adult retinal TGACCAACTG (6) 1.9 0.0019 ONL AAAATGTCAA (8) 3.8 0.0038