Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1566	Atf5	activating transcription factor 5	7		107503
Gene Ontology	anti-apoptosis | DNA binding | nucleus | regulation of cell cycle | regulation of cell proliferation | regulation of transcription from Pol II promoter | regulation of transcription, DNA-dependent | RNA polymerase II transcription factor activity | transcription factor activity | transcription factor complex | transcription factor complex
Human Homolog	ATF5[activating transcription factor 5]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 33 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCAGGCCCTG (8) 3.3 0.0033 P8 Cb GC TGGAAAAAAA (27) 3.3 0.0033 Cb medulloblastoma TGGAAAAAAA (27) 25.4 0.0254 P8 GC+1d culture TGGAAAAAAA (27) 2.3 0.0023 P8 GC+1d culture AACATAAAGC 1.1 0.0011 P8 GC+1d culture CCAGGCCTGG (2) 1.1 0.0011 P8 GC+SHH+1d culture TGGAAAAAAA (27) 11.7 0.0117 P8 GC+SHH+1d culture AACATAAAGC 1.2 0.0012 3T3 fibroblasts AACATAAAGC 10.5 0.0105 3T3 fibroblasts CCAGGCCCTG (8) 3.5 0.0035 3T3 fibroblasts CCAGGCCTGG (2) 3.5 0.0035 E15 cortex TGGAAAAAAA (27) 4.9 0.0049 Hypothalamus AACATAAAGC 3.6 0.0036 Hypothalamus CCAGGCCCTG (8) 1.8 0.0018 Hypothalamus CCAGGCCTGG (2) 1.8 0.0018 Hypothalamus TGGAAAAAAA (27) 1.8 0.0018 E12.5 retina TGGAAAAAAA (27) 5.6 0.0056 E12.5 retina AACATAAAGC 1.9 0.0019 E14.5 retina TGGAAAAAAA (27) 10.9 0.0109 E14.5 retina AACATAAAGC 1.8 0.0018 E14.5 retina CCAGGCCTGG (2) 1.8 0.0018 E14.5 retina GCATCCCTAC 1.8 0.0018 E16.5 retina TGGAAAAAAA (27) 3.6 0.0036 E18.5 retina TGGAAAAAAA (27) 18.2 0.0182 P0.5 retina TGGAAAAAAA (27) 11.8 0.0118 P0.5 retina CCAGGCCTGG (2) 2 0.002 P0.5 retina GCATCCCTAC 2 0.002 P2.5 retina TGGAAAAAAA (27) 10.6 0.0106 P4.5 retina TGGAAAAAAA (27) 2 0.002 P6.5 retina TGGAAAAAAA (27) 5 0.005 P10.5 crx- retina TGGAAAAAAA (27) 3.7 0.0037 P10.5 crx+ retina TGGAAAAAAA (27) 5.8 0.0058 Adult retinal TGGAAAAAAA (27) 3.7 0.0037