| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GTCATCTCCT (3) TGGCCAAGCC (3)
| 9.8 | 0.0098 |
| P8 GC+1d culture | GTCATCTCCT (3) TGGCCAAGCC (3)
| 15.9 | 0.0159 |
| P8 GC+SHH+1d culture | ACTCCAAAGA (2) GTCATCTCCT (3) TGGCCAAGCC (3)
| 21.1 | 0.0211 |
| 3T3 fibroblasts | GTCATCTCCT (3) TGGCCAAGCC (3)
| 7 | 0.007 |
| E15 cortex | TGGCCAAGCC (3)
| 39.6 | 0.0396 |
| P1 cortex | TGGCCAAGCC (3)
| 13.6 | 0.0136 |
| Hypothalamus | TGGCCAAGCC (3)
| 5.4 | 0.0054 |
| E12.5 retina | TGGCCAAGCC (3)
| 11.3 | 0.0113 |
| E16.5 retina | TGGCCAAGCC (3)
| 3.6 | 0.0036 |
| P0.5 retina | ACTCCAAAGA (2) AGCAGACACA (2) GTCATCTCCT (3) TGGCCAAGCC (3)
| 19.7 | 0.0197 |
| P2.5 retina | ACTCCAAAGA (2) AGCAGACACA (2) TGGCCAAGCC (3)
| 7.1 | 0.0071 |
| P4.5 retina | GTCATCTCCT (3) TGGCCAAGCC (3)
| 6 | 0.006 |
| P6.5 retina | ACTCCAAAGA (2) TGGCCAAGCC (3)
| 8.4 | 0.0084 |
| P10.5 crx- retina | TGGCCAAGCC (3)
| 3.7 | 0.0037 |
| P10.5 crx+ retina | AGCAGACACA (2) GTCATCTCCT (3) TGGCCAAGCC (3)
| 5.7 | 0.0057 |
| Adult retinal | TGGCCAAGCC (3)
| 20.4 | 0.0204 |
| ONL | TGGCCAAGCC (3)
| 3.8 | 0.0038 |