Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.156914	Sf3a1	splicing factor 3a, subunit 1	11		67465
Gene Ontology	mRNA processing | nuclear mRNA splicing, via spliceosome | nucleus | pre-mRNA splicing factor activity | RNA binding | RNA processing | spliceosome complex
Human Homolog	SF3A1[splicing factor 3a, subunit 1, 120kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 22 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTGTGATCC (2) 1.6 0.0016 P8 Cb GC TCCTACAGTC 1.6 0.0016 Cb medulloblastoma CCTGTGATCC (2) 2.3 0.0023 P8 GC+1d culture CCTGTGATCC (2) 2.3 0.0023 P8 GC+SHH+1d culture CCTGTGATCC (2) 4.7 0.0047 P8 GC+SHH+1d culture TCCTACAGTC 1.2 0.0012 P1 cortex CCTGTGATCC (2) 9.1 0.0091 P1 cortex ATACTGACAG 4.5 0.0045 Hypothalamus CCTGTGATCC (2) 3.6 0.0036 E12.5 retina CCTGTGATCC (2) 7.5 0.0075 E16.5 retina CCTGTGATCC (2) 7.2 0.0072 P0.5 retina CCTGTGATCC (2) 3.9 0.0039 P0.5 retina TCCTACAGTC 2 0.002 P2.5 retina CCTGTGATCC (2) 5.3 0.0053 P2.5 retina TCCTACAGTC 1.8 0.0018 P4.5 retina CCTGTGATCC (2) 4 0.004 P6.5 retina CCTGTGATCC (2) 1.7 0.0017 P10.5 crx- retina CCTGTGATCC (2) 3.7 0.0037 P10.5 crx+ retina CCTGTGATCC (2) 9.6 0.0096 P10.5 crx+ retina TCCTACAGTC 1.9 0.0019 Adult retinal CCTGTGATCC (2) 14.8 0.0148 Adult retinal TCCTACAGTC 1.9 0.0019