Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]
Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24

 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.156914 Sf3a1splicing factor 3a, subunit 1 11    67465 
 Gene Ontology mRNA processing | nuclear mRNA splicing, via spliceosome | nucleus | pre-mRNA splicing factor activity | RNA binding | RNA processing | spliceosome complex
 Human Homolog SF3A1[splicing factor 3a, subunit 1, 120kDa]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 89 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCCAAAAAAAAA (2)
CCTGTGATCC (2)
CCTTTAATTC (3)
CTTATTTGGT
TCCTACAGTC
570.057
Cb medulloblastomaCAAAAAAAAA (2)
CCTGTGATCC (2)
CCTTTAATTC (3)
GAGACAGAAG (4)
GATTCTCTGA
1040.104
P8 GC+1d cultureAAAGAAAATG
CAAAAAAAAA (2)
CCTGTGATCC (2)
CTTTGGTTTC (4)
GAGACAGAAG (4)
45.60.0456
P8 GC+SHH+1d cultureAAAGAAAATG
ATACAAAATA
CAAAAAAAAA (2)
CCTGTGATCC (2)
CCTTTAATTC (3)
CTTTGGTTTC (4)
GATTCTCTGA
TCCTACAGTC
76.20.0762
3T3 fibroblastsCCTTTAATTC (3)
GATTCTCTGA
10.50.0105
E15 cortexCAAAAAAAAA (2)
34.60.0346
P1 cortexATACTGACAG
CAAAAAAAAA (2)
CCTGTGATCC (2)
CCTTTAATTC (3)
CTTTGGTTTC (4)
54.40.0544
HypothalamusATACAAAATA
CAAAAAAAAA (2)
CCTGTGATCC (2)
45.20.0452
E12.5 retinaCAAAAAAAAA (2)
CCTGTGATCC (2)
CCTTTAATTC (3)
33.80.0338
E14.5 retinaATACAAAATA
CAAAAAAAAA (2)
CCTTTAATTC (3)
CTTATTTGGT
200.02
E16.5 retinaCAAAAAAAAA (2)
CCTGTGATCC (2)
CCTTTAATTC (3)
19.90.0199
E18.5 retinaCAAAAAAAAA (2)
CCTTTAATTC (3)
43.60.0436
P0.5 retinaCAAAAAAAAA (2)
CCTGTGATCC (2)
CCTTTAATTC (3)
CTTATTTGGT
CTTTGGTTTC (4)
TCCTACAGTC
TTGGTGCTGC
160.90.1609
P2.5 retinaATACAAAATA
CAAAAAAAAA (2)
CCTGTGATCC (2)
CCTTTAATTC (3)
CTTATTTGGT
CTTTGGTTTC (4)
GAGACAGAAG (4)
TCCTACAGTC
70.60.0706
P4.5 retinaAAAGAAAATG
CAAAAAAAAA (2)
CCTGTGATCC (2)
CCTTTAATTC (3)
CTTATTTGGT
53.60.0536
P6.5 retinaCAAAAAAAAA (2)
CCTGTGATCC (2)
CCTTTAATTC (3)
CTTATTTGGT
GATTCTCTGA
41.80.0418
P10.5 crx- retinaAAAGAAAATG
CAAAAAAAAA (2)
CCTGTGATCC (2)
CCTTTAATTC (3)
20.50.0205
P10.5 crx+ retinaATACAAAATA
CAAAAAAAAA (2)
CCTGTGATCC (2)
TCCTACAGTC
TTGGTGCTGC
49.90.0499
Adult retinalCAAAAAAAAA (2)
CCTGTGATCC (2)
CCTTTAATTC (3)
TCCTACAGTC
390.039
ONLATACAAAATA
CAAAAAAAAA (2)
CCTTTAATTC (3)
CTTTGGTTTC (4)
GAGACAGAAG (4)
26.70.0267