Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.157105	Psmc1	protease (prosome, macropain) 26S subunit, ATPase 1	12	12 41.0 cM	19179
Gene Ontology	ATP binding | ATPase activity | cytoplasm | cytosol | hydrolase activity | nucleotide binding | nucleus | proteasome complex (sensu Eukarya) | protein catabolism
Human Homolog	PSMC1[proteasome (prosome, macropain) 26S subunit, ATPase, 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 42 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CGCCGTCCAT 3.3 0.0033 P8 Cb GC GCAAAGGATG 3.3 0.0033 P8 Cb GC GAGGAGGAAT (2) 1.6 0.0016 Cb medulloblastoma GCAAAGGATG 9.2 0.0092 Cb medulloblastoma CGCCGTCCAT 2.3 0.0023 Cb medulloblastoma GAGGAGGAAT (2) 2.3 0.0023 Cb medulloblastoma GCCACAAACC 2.3 0.0023 P8 GC+1d culture GCAAAGGATG 8 0.008 P8 GC+1d culture GTCCTGGGGG (3) 1.1 0.0011 P8 GC+SHH+1d culture GCAAAGGATG 4.7 0.0047 3T3 fibroblasts GCAAAGGATG 10.5 0.0105 3T3 fibroblasts GTCCTGGGGG (3) 7 0.007 E15 cortex GTCCTGGGGG (3) 19.8 0.0198 E15 cortex GCAAAGGATG 9.9 0.0099 E15 cortex GCCACAAACC 4.9 0.0049 P1 cortex GCAAAGGATG 4.5 0.0045 Hypothalamus GCAAAGGATG 5.4 0.0054 Hypothalamus GAGGAGGAAT (2) 1.8 0.0018 Hypothalamus GCCCCCCTCC 1.8 0.0018 E12.5 retina GCAAAGGATG 9.4 0.0094 E14.5 retina GCAAAGGATG 3.6 0.0036 E14.5 retina GCCACAAACC 1.8 0.0018 E16.5 retina GCAAAGGATG 1.8 0.0018 E16.5 retina GCCACAAACC 1.8 0.0018 E18.5 retina GTCCTGGGGG (3) 5.5 0.0055 E18.5 retina GCAAAGGATG 1.8 0.0018 E18.5 retina GCCCCCCTCC 1.8 0.0018 P0.5 retina GCAAAGGATG 5.9 0.0059 P0.5 retina GTCCTGGGGG (3) 3.9 0.0039 P2.5 retina GCAAAGGATG 3.5 0.0035 P2.5 retina GTCCTGGGGG (3) 3.5 0.0035 P4.5 retina GCAAAGGATG 2 0.002 P4.5 retina GCCCCCCTCC 2 0.002 P6.5 retina GCAAAGGATG 8.3 0.0083 P6.5 retina GTCCTGGGGG (3) 1.7 0.0017 P10.5 crx- retina GCAAAGGATG 16.7 0.0167 P10.5 crx+ retina GCAAAGGATG 7.7 0.0077 P10.5 crx+ retina GTCCTGGGGG (3) 1.9 0.0019 Adult retinal GCAAAGGATG 13 0.013 Adult retinal GCCCCCCTCC 1.9 0.0019 ONL GCAAAGGATG 3.8 0.0038 ONL GAGGAGGAAT (2) 1.9 0.0019