Mouse Retina SAGE Library
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Gene: 
Accession: 
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag: 
Cytoband (Mm): 
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene: 
Cytoband (Hs): 
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.158726
AF013969
expressed sequence AF013969
5
100563
Mm.158726
A230054D04Rik
RIKEN cDNA A230054D04 gene
5
320819
Mm.158726
8430439J12Rik
RIKEN cDNA 8430439J12 gene
5
71553
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 103 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
ATTTGTATCT (
7
)
6.5
0.0065
P8 Cb GC
CCACCTCGTG (
5
)
1.6
0.0016
P8 Cb GC
GTCCTCCTCC (
6
)
1.6
0.0016
P8 Cb GC
TGAATTTCTG (
6
)
1.6
0.0016
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
Cb medulloblastoma
ATTTGTATCT (
7
)
2.3
0.0023
Cb medulloblastoma
TAAAAACAGG
(
3
)
2.3
0.0023
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
ATTTGTATCT (
7
)
12.6
0.0126
P8 GC+1d culture
ACAAGGCTGC (
4
)
4.6
0.0046
P8 GC+1d culture
ATTTAACTCC
(
5
)
1.1
0.0011
P8 GC+1d culture
GTTGGTGCTA (
5
)
1.1
0.0011
P8 GC+1d culture
TAAAAACAGG
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
ATTTGTATCT (
7
)
8.2
0.0082
P8 GC+SHH+1d culture
ACAAGGCTGC (
4
)
1.2
0.0012
P8 GC+SHH+1d culture
GTTGGTGCTA (
5
)
1.2
0.0012
P8 GC+SHH+1d culture
TGAATTTCTG (
6
)
1.2
0.0012
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
3T3 fibroblasts
GTCATAGCTG (
590
)
10.5
0.0105
3T3 fibroblasts
CCACCTCGTG (
5
)
3.5
0.0035
3T3 fibroblasts
GTTGGTGCTA (
5
)
3.5
0.0035
3T3 fibroblasts
TGAATTTCTG (
6
)
3.5
0.0035
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
E15 cortex
AAAAGGGCAG
(
3
)
4.9
0.0049
E15 cortex
ATTTAACTCC
(
5
)
4.9
0.0049
E15 cortex
GTCATAGCTG (
590
)
4.9
0.0049
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
P1 cortex
ATTTGTATCT (
7
)
9.1
0.0091
P1 cortex
CCACCTCGTG (
5
)
4.5
0.0045
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
ACAAGGCTGC (
4
)
1.8
0.0018
Hypothalamus
ATTTGTATCT (
7
)
1.8
0.0018
Hypothalamus
CTTATGTTCA
(
5
)
1.8
0.0018
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
ATTTGTATCT (
7
)
3.8
0.0038
E12.5 retina
ACAAGGCTGC (
4
)
1.9
0.0019
E12.5 retina
GTCCTCCTCC (
6
)
1.9
0.0019
E12.5 retina
TAAAAACAGG
(
3
)
1.9
0.0019
E12.5 retina
TGCTTCAGAA (
10
)
1.9
0.0019
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
ATTTGTATCT (
7
)
7.3
0.0073
E14.5 retina
ACAAGGCTGC (
4
)
3.6
0.0036
E14.5 retina
GTCCTCCTCC (
6
)
3.6
0.0036
E14.5 retina
AAAAGGGCAG
(
3
)
1.8
0.0018
E14.5 retina
ACTTGGGTGT
(
3
)
1.8
0.0018
E14.5 retina
ATTTAACTCC
(
5
)
1.8
0.0018
E14.5 retina
CCACCTCGTG (
5
)
1.8
0.0018
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E16.5 retina
ATTTGTATCT (
7
)
12.7
0.0127
E16.5 retina
ACAAGGCTGC (
4
)
3.6
0.0036
E16.5 retina
GTCCTCCTCC (
6
)
1.8
0.0018
E16.5 retina
GTTGGTGCTA (
5
)
1.8
0.0018
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
E18.5 retina
ATTTGTATCT (
7
)
12.7
0.0127
E18.5 retina
CTTATGTTCA
(
5
)
1.8
0.0018
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P0.5 retina
ATTTGTATCT (
7
)
9.8
0.0098
P0.5 retina
GTCATAGCTG (
590
)
3.9
0.0039
P0.5 retina
AAAAGGGCAG
(
3
)
2
0.002
P0.5 retina
ACTTGGGTGT
(
3
)
2
0.002
P0.5 retina
ATTTAACTCC
(
5
)
2
0.002
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
ATTTGTATCT (
7
)
12.3
0.0123
P2.5 retina
ACAAGGCTGC (
4
)
1.8
0.0018
P2.5 retina
GTCATAGCTG (
590
)
1.8
0.0018
P2.5 retina
GTTGGTGCTA (
5
)
1.8
0.0018
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
ATTTGTATCT (
7
)
9.9
0.0099
P4.5 retina
ACTTGGGTGT
(
3
)
2
0.002
P4.5 retina
CTTATGTTCA
(
5
)
2
0.002
P4.5 retina
GTCATAGCTG (
590
)
2
0.002
P4.5 retina
TGCTTCAGAA (
10
)
2
0.002
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P6.5 retina
AAATACCTGA (
17
)
8.3
0.0083
P6.5 retina
ACAAGGCTGC (
4
)
3.3
0.0033
P6.5 retina
GTCATAGCTG (
590
)
3.3
0.0033
P6.5 retina
ACTTGGGTGT
(
3
)
1.7
0.0017
P6.5 retina
ATTTGTATCT (
7
)
1.7
0.0017
P10.5 crx- retina
AAATACCTGA (
17
)
48.3
0.0483
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx- retina
ATTTGTATCT (
7
)
7.4
0.0074
P10.5 crx- retina
CTTATGTTCA
(
5
)
3.7
0.0037
P10.5 crx- retina
GTTGGTGCTA (
5
)
3.7
0.0037
P10.5 crx- retina
ACTTGGGTGT
(
3
)
1.9
0.0019
P10.5 crx- retina
ATTTAACTCC
(
5
)
1.9
0.0019
P10.5 crx- retina
TGAATTTCTG (
6
)
1.9
0.0019
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
P10.5 crx+ retina
AAATACCTGA (
17
)
21.1
0.0211
P10.5 crx+ retina
ATTTGTATCT (
7
)
9.6
0.0096
P10.5 crx+ retina
CTTATGTTCA
(
5
)
1.9
0.0019
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
Adult retinal
ATTTGTATCT (
7
)
7.4
0.0074
Adult retinal
AAATACCTGA (
17
)
3.7
0.0037
Adult retinal
ACAAGGCTGC (
4
)
1.9
0.0019
Adult retinal
GTCATAGCTG (
590
)
1.9
0.0019
Adult retinal
TGAATTTCTG (
6
)
1.9
0.0019
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
AAATACCTGA (
17
)
15.3
0.0153
ONL
GTCATAGCTG (
590
)
5.7
0.0057
ONL
ATTTGTATCT (
7
)
1.9
0.0019
ONL
TGCTTCAGAA (
10
)
1.9
0.0019