Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.159290
4930538D17Rik
RIKEN cDNA 4930538D17 gene
19
75146
Human Homolog
C10orf77[chromosome 10 open reading frame 77]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 43 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGCCGCTGCT
(
3
)
44
0.044
P8 Cb GC
GGGCTGGAAT (
5
)
6.5
0.0065
Cb medulloblastoma
GGCCGCTGCT
(
3
)
57.8
0.0578
P8 GC+1d culture
GGCCGCTGCT
(
3
)
33.1
0.0331
P8 GC+1d culture
GGGCTGGAAT (
5
)
3.4
0.0034
P8 GC+1d culture
AAGGAAGAGG
(
10
)
2.3
0.0023
P8 GC+1d culture
CCCTCTGCTG
2.3
0.0023
P8 GC+SHH+1d culture
GGCCGCTGCT
(
3
)
32.8
0.0328
P8 GC+SHH+1d culture
GGGCTGGAAT (
5
)
5.9
0.0059
3T3 fibroblasts
GGGCTGGAAT (
5
)
3.5
0.0035
E15 cortex
GGCCGCTGCT
(
3
)
44.5
0.0445
E15 cortex
GGGCTGGAAT (
5
)
4.9
0.0049
P1 cortex
GGCCGCTGCT
(
3
)
36.4
0.0364
P1 cortex
GGGCTGGAAT (
5
)
4.5
0.0045
Hypothalamus
GGCCGCTGCT
(
3
)
39.8
0.0398
Hypothalamus
GGGCTGGAAT (
5
)
9.1
0.0091
Hypothalamus
GGAGACGCTT
1.8
0.0018
E12.5 retina
GGCCGCTGCT
(
3
)
13.1
0.0131
E14.5 retina
GGCCGCTGCT
(
3
)
18.2
0.0182
E14.5 retina
GGGCTGGAAT (
5
)
5.5
0.0055
E16.5 retina
GGCCGCTGCT
(
3
)
23.5
0.0235
E18.5 retina
GGCCGCTGCT
(
3
)
38.2
0.0382
E18.5 retina
GGGCTGGAAT (
5
)
7.3
0.0073
E18.5 retina
TGGTGCTCAG (
5
)
3.6
0.0036
E18.5 retina
CCCTCTGCTG
1.8
0.0018
P0.5 retina
GGCCGCTGCT
(
3
)
19.6
0.0196
P0.5 retina
AAGGAAGAGG
(
10
)
2
0.002
P2.5 retina
GGCCGCTGCT
(
3
)
47.5
0.0475
P2.5 retina
GGGCTGGAAT (
5
)
3.5
0.0035
P2.5 retina
CCCTCTGCTG
1.8
0.0018
P4.5 retina
GGCCGCTGCT
(
3
)
69.3
0.0693
P4.5 retina
CCCTCTGCTG
2
0.002
P4.5 retina
TGGTGCTCAG (
5
)
2
0.002
P6.5 retina
GGCCGCTGCT
(
3
)
48.4
0.0484
P10.5 crx- retina
GGCCGCTGCT
(
3
)
52
0.052
P10.5 crx- retina
GGGCTGGAAT (
5
)
5.6
0.0056
P10.5 crx+ retina
GGCCGCTGCT
(
3
)
103.8
0.1038
Adult retinal
GGCCGCTGCT
(
3
)
27.8
0.0278
Adult retinal
GGGCTGGAAT (
5
)
7.4
0.0074
Adult retinal
TGGTGCTCAG (
5
)
1.9
0.0019
ONL
GGCCGCTGCT
(
3
)
11.5
0.0115
ONL
GGAGACGCTT
3.8
0.0038
ONL
GGGCTGGAAT (
5
)
3.8
0.0038
