Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.159552	Amotl1	angiomotin-like 1	9		75723
Gene Ontology	biological_process unknown | molecular_function unknown | tight junction
Human Homolog	AMOTL1[angiomotin like 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 96 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CACACACACA (106) 11.4 0.0114 P8 Cb GC GAGCTGGTGA (8) 4.9 0.0049 P8 Cb GC AAAAACCAAA (8) 1.6 0.0016 P8 Cb GC CATACATACT (6) 1.6 0.0016 P8 Cb GC GCTTCCCTCC 1.6 0.0016 P8 Cb GC TTGACTTTCT (3) 1.6 0.0016 Cb medulloblastoma CACACACACA (106) 32.4 0.0324 Cb medulloblastoma AAAAACCAAA (8) 6.9 0.0069 Cb medulloblastoma CATACATACT (6) 4.6 0.0046 Cb medulloblastoma AACCTGCTGG (4) 2.3 0.0023 Cb medulloblastoma GAGCTGGTGA (8) 2.3 0.0023 P8 GC+1d culture GAGCTGGTGA (8) 12.6 0.0126 P8 GC+1d culture CACACACACA (106) 6.8 0.0068 P8 GC+1d culture CACACGCACA (15) 1.1 0.0011 P8 GC+1d culture CATACATACT (6) 1.1 0.0011 P8 GC+SHH+1d culture CACACACACA (106) 9.4 0.0094 P8 GC+SHH+1d culture GAGCTGGTGA (8) 4.7 0.0047 P8 GC+SHH+1d culture CCCCCAGCAG (3) 2.3 0.0023 P8 GC+SHH+1d culture CTCTGATGTG (4) 1.2 0.0012 3T3 fibroblasts CACACACACA (106) 17.5 0.0175 3T3 fibroblasts TGTAACCTTT 7 0.007 3T3 fibroblasts CATACATACT (6) 3.5 0.0035 E15 cortex AAAAACCAAA (8) 4.9 0.0049 E15 cortex CACACACACA (106) 4.9 0.0049 E15 cortex GAGCTGGTGA (8) 4.9 0.0049 E15 cortex GCTTCCCTCC 4.9 0.0049 P1 cortex CACACACACA (106) 27.3 0.0273 P1 cortex AAAAACCAAA (8) 4.5 0.0045 P1 cortex CTCTGATGTG (4) 4.5 0.0045 Hypothalamus CACACACACA (106) 96 0.096 Hypothalamus GAGCTGGTGA (8) 5.4 0.0054 Hypothalamus CTCTGATGTG (4) 3.6 0.0036 Hypothalamus AACCTGCTGG (4) 1.8 0.0018 Hypothalamus CACACGCACA (15) 1.8 0.0018 Hypothalamus TGTAACCTTT 1.8 0.0018 E12.5 retina GAGCTGGTGA (8) 9.4 0.0094 E12.5 retina AAAAACCAAA (8) 3.8 0.0038 E12.5 retina CACACACACA (106) 3.8 0.0038 E12.5 retina CCCCCAGCCA (4) 1.9 0.0019 E12.5 retina CTCTGATGTG (4) 1.9 0.0019 E14.5 retina CACACACACA (106) 18.2 0.0182 E14.5 retina CATACATACT (6) 1.8 0.0018 E14.5 retina GAGCTGGTGA (8) 1.8 0.0018 E16.5 retina CACACACACA (106) 12.7 0.0127 E16.5 retina CTCTGATGTG (4) 5.4 0.0054 E16.5 retina GAGCTGGTGA (8) 5.4 0.0054 E16.5 retina AAAAACCAAA (8) 1.8 0.0018 E16.5 retina CCCCCAGCCA (4) 1.8 0.0018 E18.5 retina CACACACACA (106) 5.5 0.0055 E18.5 retina CCCCCAGCCA (4) 3.6 0.0036 E18.5 retina AAAAACCAAA (8) 1.8 0.0018 E18.5 retina GAGCTGGTGA (8) 1.8 0.0018 P0.5 retina CTCTGATGTG (4) 11.8 0.0118 P0.5 retina CACACACACA (106) 7.9 0.0079 P0.5 retina CACACGCACA (15) 2 0.002 P0.5 retina CCCCCAGCCA (4) 2 0.002 P0.5 retina GAGCTGGTGA (8) 2 0.002 P0.5 retina TGTAACCATT (7) 2 0.002 P0.5 retina TGTAACCTTT 2 0.002 P2.5 retina CACACACACA (106) 21.1 0.0211 P2.5 retina GAGCTGGTGA (8) 7 0.007 P2.5 retina CTCTGATGTG (4) 3.5 0.0035 P4.5 retina CACACACACA (106) 7.9 0.0079 P4.5 retina GAGCTGGTGA (8) 5.9 0.0059 P4.5 retina AAAAACCAAA (8) 4 0.004 P4.5 retina CTCTGATGTG (4) 4 0.004 P4.5 retina TGTAACCTTT 4 0.004 P4.5 retina TTGACTTTCT (3) 4 0.004 P6.5 retina CACACACACA (106) 8.3 0.0083 P6.5 retina GAGCTGGTGA (8) 8.3 0.0083 P6.5 retina CTCTGATGTG (4) 6.7 0.0067 P6.5 retina AACCTGCTGG (4) 1.7 0.0017 P6.5 retina TGGAGTCTGT (2) 1.7 0.0017 P10.5 crx- retina GAGCTGGTGA (8) 13 0.013 P10.5 crx- retina CACACACACA (106) 5.6 0.0056 P10.5 crx- retina AACCTGCTGG (4) 3.7 0.0037 P10.5 crx- retina CTCTGATGTG (4) 3.7 0.0037 P10.5 crx- retina AAAAACCAAA (8) 1.9 0.0019 P10.5 crx+ retina CACACACACA (106) 7.7 0.0077 P10.5 crx+ retina CTCTGATGTG (4) 5.8 0.0058 P10.5 crx+ retina GAGCTGGTGA (8) 3.8 0.0038 P10.5 crx+ retina AAAAACCAAA (8) 1.9 0.0019 P10.5 crx+ retina CACACGCACA (15) 1.9 0.0019 Adult retinal CACACACACA (106) 16.7 0.0167 Adult retinal CTCTGATGTG (4) 11.1 0.0111 Adult retinal TGTAACCATT (7) 3.7 0.0037 Adult retinal AACCTGCTGG (4) 1.9 0.0019 Adult retinal CACACGCACA (15) 1.9 0.0019 Adult retinal CCCCCAGCAG (3) 1.9 0.0019 Adult retinal GCTTCCCTCC 1.9 0.0019 Adult retinal TGGAGTCTGT (2) 1.9 0.0019 ONL CACACACACA (106) 21.1 0.0211 ONL GAGCTGGTGA (8) 7.7 0.0077 ONL CACACGCACA (15) 5.7 0.0057 ONL CTCTGATGTG (4) 1.9 0.0019 ONL TGGAGTCTGT (2) 1.9 0.0019