Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.15974	1810030O07Rik	RIKEN cDNA 1810030O07 gene	X		69155
Human Homolog	CXorf38[chromosome X open reading frame 38]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 86 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATGTCAAAAT (3) 8.2 0.0082 P8 Cb GC CATCTGTGTA 4.9 0.0049 P8 Cb GC CTTGGTACTT (2) 1.6 0.0016 P8 Cb GC TAGCCCAGGC (30) 1.6 0.0016 Cb medulloblastoma ATGTCAAAAT (3) 11.6 0.0116 Cb medulloblastoma GTGGGAGGAG (5) 6.9 0.0069 Cb medulloblastoma TAGCCCAGGC (30) 4.6 0.0046 Cb medulloblastoma CATCTGTGTA 2.3 0.0023 Cb medulloblastoma CTTGGTACTT (2) 2.3 0.0023 Cb medulloblastoma GCACGCCAGG 2.3 0.0023 Cb medulloblastoma TCTTTTGCCT 2.3 0.0023 P8 GC+1d culture CATCTGTGTA 2.3 0.0023 P8 GC+1d culture CTTGGTACTT (2) 1.1 0.0011 P8 GC+1d culture GTGGGAGGAG (5) 1.1 0.0011 P8 GC+1d culture TAGCCCAGGC (30) 1.1 0.0011 P8 GC+1d culture TATTTCAACT (8) 1.1 0.0011 P8 GC+SHH+1d culture TAGCCCAGGC (30) 8.2 0.0082 P8 GC+SHH+1d culture CATCTGTGTA 5.9 0.0059 P8 GC+SHH+1d culture ATGTCAAAAT (3) 3.5 0.0035 P8 GC+SHH+1d culture CTTGGTACTT (2) 1.2 0.0012 P8 GC+SHH+1d culture GTGGGAGGAG (5) 1.2 0.0012 P8 GC+SHH+1d culture TATTTCAACT (8) 1.2 0.0012 3T3 fibroblasts TAGCCCAGGC (30) 14 0.014 3T3 fibroblasts GTGGGAGGAG (5) 10.5 0.0105 E15 cortex TAGCCCAGGC (30) 24.7 0.0247 E15 cortex ATGTCAAAAT (3) 9.9 0.0099 E15 cortex CATCTGTGTA 4.9 0.0049 P1 cortex CATCTGTGTA 9.1 0.0091 P1 cortex GTGGGAGGAG (5) 4.5 0.0045 Hypothalamus ATGTCAAAAT (3) 12.7 0.0127 Hypothalamus CATCTGTGTA 7.2 0.0072 Hypothalamus TAGCCCAGGC (30) 7.2 0.0072 Hypothalamus GTGGGAGGAG (5) 1.8 0.0018 E12.5 retina TAGCCCAGGC (30) 7.5 0.0075 E12.5 retina CTTGGTACTT (2) 3.8 0.0038 E12.5 retina GTGGGAGGAG (5) 3.8 0.0038 E12.5 retina ATGTCAAAAT (3) 1.9 0.0019 E12.5 retina CATCTGTGTA 1.9 0.0019 E14.5 retina TAGCCCAGGC (30) 12.8 0.0128 E14.5 retina ATGTCAAAAT (3) 10.9 0.0109 E14.5 retina ATGCATTCAA (3) 1.8 0.0018 E16.5 retina TAGCCCAGGC (30) 7.2 0.0072 E16.5 retina ATGCATTCAA (3) 3.6 0.0036 E16.5 retina ATGTCAAAAT (3) 3.6 0.0036 E16.5 retina CATCTGTGTA 1.8 0.0018 E16.5 retina TCTTTTGCCT 1.8 0.0018 E18.5 retina ATGTCAAAAT (3) 12.7 0.0127 E18.5 retina CATCTGTGTA 9.1 0.0091 E18.5 retina TAGCCCAGGC (30) 7.3 0.0073 E18.5 retina GCACGCCAGG 1.8 0.0018 E18.5 retina GTGGGAGGAG (5) 1.8 0.0018 P0.5 retina CATCTGTGTA 5.9 0.0059 P0.5 retina TAGCCCAGGC (30) 5.9 0.0059 P0.5 retina ATGTCAAAAT (3) 3.9 0.0039 P0.5 retina GTGGGAGGAG (5) 3.9 0.0039 P0.5 retina GCACGCCAGG 2 0.002 P0.5 retina TATTTCAACT (8) 2 0.002 P2.5 retina TAGCCCAGGC (30) 8.8 0.0088 P2.5 retina ATGTCAAAAT (3) 5.3 0.0053 P2.5 retina CATCTGTGTA 1.8 0.0018 P2.5 retina CTTGGTACTT (2) 1.8 0.0018 P2.5 retina TATTTCAACT (8) 1.8 0.0018 P4.5 retina CATCTGTGTA 11.9 0.0119 P4.5 retina ATGTCAAAAT (3) 9.9 0.0099 P4.5 retina GTGGGAGGAG (5) 4 0.004 P4.5 retina TAGCCCAGGC (30) 2 0.002 P6.5 retina TAGCCCAGGC (30) 5 0.005 P6.5 retina ATGTCAAAAT (3) 3.3 0.0033 P6.5 retina CATCTGTGTA 1.7 0.0017 P6.5 retina TCTTTTGCCT 1.7 0.0017 P10.5 crx- retina CTTGGTACTT (2) 5.6 0.0056 P10.5 crx- retina CATCTGTGTA 3.7 0.0037 P10.5 crx- retina ATGTCAAAAT (3) 1.9 0.0019 P10.5 crx- retina TAGCCCAGGC (30) 1.9 0.0019 P10.5 crx+ retina ATGTCAAAAT (3) 3.8 0.0038 P10.5 crx+ retina TAGCCCAGGC (30) 3.8 0.0038 P10.5 crx+ retina CATCTGTGTA 1.9 0.0019 P10.5 crx+ retina CTTGGTACTT (2) 1.9 0.0019 P10.5 crx+ retina GTGGGAGGAG (5) 1.9 0.0019 Adult retinal GTGGGAGGAG (5) 3.7 0.0037 Adult retinal ATGTCAAAAT (3) 1.9 0.0019 Adult retinal CATCTGTGTA 1.9 0.0019 Adult retinal TAGCCCAGGC (30) 1.9 0.0019 ONL TAGCCCAGGC (30) 9.6 0.0096 ONL CATCTGTGTA 3.8 0.0038 ONL ATGTCAAAAT (3) 1.9 0.0019