Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.160124	Phactr1	phosphatase and actin regulator 1	13	13 A4	218194
Human Homolog	PHACTR1[phosphatase and actin regulator 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 60 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGCACACACA (29) 8.2 0.0082 P8 Cb GC GTATTTAAAT 3.3 0.0033 P8 Cb GC TAAATCCGAA 3.3 0.0033 Cb medulloblastoma TAAATCCGAA 2.3 0.0023 Cb medulloblastoma TGCACACACA (29) 2.3 0.0023 Cb medulloblastoma TGTGCTGTGG (6) 2.3 0.0023 P8 GC+1d culture TGCACACACA (29) 9.1 0.0091 P8 GC+1d culture TAAATCCGAA 5.7 0.0057 P8 GC+1d culture GTATTTAAAT 2.3 0.0023 P8 GC+1d culture GGGACCCCTG (7) 1.1 0.0011 P8 GC+SHH+1d culture TGCACACACA (29) 16.4 0.0164 P8 GC+SHH+1d culture GTATTTAAAT 2.3 0.0023 3T3 fibroblasts TGCACACACA (29) 14 0.014 E15 cortex TAAATCCGAA 9.9 0.0099 E15 cortex GCTTCCCCAC (3) 4.9 0.0049 E15 cortex TGTGCTGTGG (6) 4.9 0.0049 P1 cortex GTATTTAAAT 9.1 0.0091 P1 cortex GCTTCCCCAC (3) 4.5 0.0045 P1 cortex TAAATCCGAA 4.5 0.0045 P1 cortex TGCACACACA (29) 4.5 0.0045 Hypothalamus GGGACCCCTG (7) 5.4 0.0054 Hypothalamus GCTTCCCCAC (3) 1.8 0.0018 Hypothalamus GTATTTAAAT 1.8 0.0018 Hypothalamus TGCACACACA (29) 1.8 0.0018 E12.5 retina TGCACACACA (29) 5.6 0.0056 E14.5 retina TGCACACACA (29) 9.1 0.0091 E14.5 retina TGTGCTGTGG (6) 1.8 0.0018 E16.5 retina TGCACACACA (29) 9.1 0.0091 E16.5 retina GTATTTAAAT 1.8 0.0018 E18.5 retina TGCACACACA (29) 7.3 0.0073 E18.5 retina TAAATCCGAA 3.6 0.0036 E18.5 retina GTATTTAAAT 1.8 0.0018 E18.5 retina GTGAAACCTT 1.8 0.0018 P0.5 retina GTGAAACCTT 2 0.002 P0.5 retina TGCACACACA (29) 2 0.002 P0.5 retina TGTGCTGTGG (6) 2 0.002 P2.5 retina TAAATCCGAA 5.3 0.0053 P2.5 retina GTATTTAAAT 3.5 0.0035 P2.5 retina TGCACACACA (29) 3.5 0.0035 P4.5 retina GTATTTAAAT 11.9 0.0119 P4.5 retina TAAATCCGAA 7.9 0.0079 P4.5 retina GGGACCCCTG (7) 2 0.002 P4.5 retina TGCACACACA (29) 2 0.002 P4.5 retina TGTGCTGTGG (6) 2 0.002 P6.5 retina TGCACACACA (29) 11.7 0.0117 P6.5 retina TGTGCTGTGG (6) 3.3 0.0033 P6.5 retina GTATTTAAAT 1.7 0.0017 P6.5 retina TAAATCCGAA 1.7 0.0017 P10.5 crx- retina GTATTTAAAT 3.7 0.0037 P10.5 crx- retina TGCACACACA (29) 3.7 0.0037 P10.5 crx- retina GGGACCCCTG (7) 1.9 0.0019 P10.5 crx- retina TAAATCCGAA 1.9 0.0019 P10.5 crx+ retina TGCACACACA (29) 9.6 0.0096 P10.5 crx+ retina GTATTTAAAT 3.8 0.0038 Adult retinal TGCACACACA (29) 9.3 0.0093 Adult retinal TAAATCCGAA 1.9 0.0019 Adult retinal TGTGCTGTGG (6) 1.9 0.0019 ONL TGCACACACA (29) 15.3 0.0153 ONL AGAGAAAGAA (10) 3.8 0.0038 ONL TGTGCTGTGG (6) 3.8 0.0038