Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1605	2310035P21Rik	RIKEN cDNA 2310035P21 gene	19		75683
Mm.1605	Pdcd4	programmed cell death 4	19	19 20.0 cM	18569
Gene Ontology	isomerase activity
Human Homolog	PDCD4[programmed cell death 4 (neoplastic transformation inhibitor)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 83 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGAAACACTG (4) 21.2 0.0212 P8 Cb GC GCACTTAGAA (2) 4.9 0.0049 P8 Cb GC TGGATCTCTG (4) 4.9 0.0049 P8 Cb GC TTTTATTTTG (8) 3.3 0.0033 P8 Cb GC ACTAACTCGT (3) 1.6 0.0016 P8 Cb GC TTGGCTGCTG (4) 1.6 0.0016 Cb medulloblastoma TGGATCTCTG (4) 27.7 0.0277 Cb medulloblastoma TTTTATTTTG (8) 6.9 0.0069 Cb medulloblastoma TGAAACACTG (4) 2.3 0.0023 Cb medulloblastoma TTGGCTGCTG (4) 2.3 0.0023 P8 GC+1d culture TGAAACACTG (4) 9.1 0.0091 P8 GC+1d culture TTTTATTTTG (8) 9.1 0.0091 P8 GC+1d culture GCACTTAGAA (2) 2.3 0.0023 P8 GC+1d culture TGAAACACTA (2) 1.1 0.0011 P8 GC+1d culture TTGGCTGCTG (4) 1.1 0.0011 P8 GC+SHH+1d culture TGAAACACTG (4) 17.6 0.0176 P8 GC+SHH+1d culture TTTTATTTTG (8) 5.9 0.0059 P8 GC+SHH+1d culture GCACTTAGAA (2) 3.5 0.0035 P8 GC+SHH+1d culture ACTAACTCGT (3) 2.3 0.0023 3T3 fibroblasts TGAAACACTG (4) 3.5 0.0035 3T3 fibroblasts TTGGCTGCTG (4) 3.5 0.0035 E15 cortex GCACTTAGAA (2) 4.9 0.0049 E15 cortex TGAAACACTG (4) 4.9 0.0049 E15 cortex TGGATCTCTG (4) 4.9 0.0049 P1 cortex TTTTATTTTG (8) 31.8 0.0318 P1 cortex GCACTTAGAA (2) 4.5 0.0045 P1 cortex TGGATCTCTG (4) 4.5 0.0045 Hypothalamus TTTTATTTTG (8) 9.1 0.0091 Hypothalamus TGAAACACTG (4) 3.6 0.0036 Hypothalamus TTGGCTGCTG (4) 3.6 0.0036 Hypothalamus TGGATCTCTG (4) 1.8 0.0018 E12.5 retina TGAAACACTG (4) 5.6 0.0056 E12.5 retina ACTAACTCGT (3) 3.8 0.0038 E12.5 retina GCACTTAGAA (2) 1.9 0.0019 E12.5 retina TGGATCTCTG (4) 1.9 0.0019 E14.5 retina ACTAACTCGT (3) 5.5 0.0055 E14.5 retina TGAAACACTG (4) 3.6 0.0036 E14.5 retina GCACTTAGAA (2) 1.8 0.0018 E14.5 retina GGGAAGAAAG (4) 1.8 0.0018 E14.5 retina TGGATCTCTG (4) 1.8 0.0018 E16.5 retina TGAAACACTG (4) 7.2 0.0072 E16.5 retina TTTTATTTTG (8) 5.4 0.0054 E16.5 retina GCACTTAGAA (2) 1.8 0.0018 E16.5 retina TGGATCTCTG (4) 1.8 0.0018 E16.5 retina TTGGCTGCTG (4) 1.8 0.0018 E18.5 retina TGAAACACTG (4) 18.2 0.0182 E18.5 retina ACTAACTCGT (3) 5.5 0.0055 E18.5 retina TTTTATTTTG (8) 5.5 0.0055 E18.5 retina TGGATCTCTG (4) 3.6 0.0036 P0.5 retina TGAAACACTG (4) 7.9 0.0079 P0.5 retina GCACTTAGAA (2) 3.9 0.0039 P0.5 retina ACTAACTCGT (3) 2 0.002 P0.5 retina GGGAAGAAAG (4) 2 0.002 P2.5 retina TGAAACACTG (4) 21.1 0.0211 P2.5 retina ACTAACTCGT (3) 5.3 0.0053 P2.5 retina TTTTATTTTG (8) 3.5 0.0035 P2.5 retina GCACTTAGAA (2) 1.8 0.0018 P4.5 retina TGAAACACTG (4) 31.7 0.0317 P4.5 retina GCACTTAGAA (2) 7.9 0.0079 P4.5 retina ACTAACTCGT (3) 5.9 0.0059 P4.5 retina TTTTATTTTG (8) 4 0.004 P4.5 retina TGGATCTCTG (4) 2 0.002 P6.5 retina TGAAACACTG (4) 15 0.015 P6.5 retina GCACTTAGAA (2) 10 0.01 P6.5 retina TTTTATTTTG (8) 6.7 0.0067 P6.5 retina ACTAACTCGT (3) 3.3 0.0033 P6.5 retina TGGATCTCTG (4) 3.3 0.0033 P6.5 retina TGAAACACTA (2) 1.7 0.0017 P10.5 crx- retina GCACTTAGAA (2) 9.3 0.0093 P10.5 crx- retina TGAAACACTG (4) 7.4 0.0074 P10.5 crx- retina TTTTATTTTG (8) 7.4 0.0074 P10.5 crx+ retina TGAAACACTG (4) 13.5 0.0135 P10.5 crx+ retina GCACTTAGAA (2) 3.8 0.0038 P10.5 crx+ retina GGGAAGAAAG (4) 3.8 0.0038 P10.5 crx+ retina ACTAACTCGT (3) 1.9 0.0019 P10.5 crx+ retina TGGATCTCTG (4) 1.9 0.0019 P10.5 crx+ retina TTTTATTTTG (8) 1.9 0.0019 Adult retinal TGAAACACTG (4) 13 0.013 Adult retinal TTTTATTTTG (8) 9.3 0.0093 Adult retinal TGGATCTCTG (4) 1.9 0.0019 ONL TTTTATTTTG (8) 7.7 0.0077 ONL TGAAACACTG (4) 3.8 0.0038 ONL GCACTTAGAA (2) 1.9 0.0019