| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAACGGTAAG CCCAGGCTCT (2)
| 4.9 | 0.0049 |
| Cb medulloblastoma | AAACGGTAAG CCCAGGCTCT (2) GTGGCCTTTG (3)
| 6.9 | 0.0069 |
| P8 GC+1d culture | AAACGGTAAG CCCAGGCTCT (2)
| 10.3 | 0.0103 |
| P8 GC+SHH+1d culture | AAACGGTAAG CCCAGGCTCT (2) GTGGCCTTTG (3)
| 11.7 | 0.0117 |
| 3T3 fibroblasts | AAACGGTAAG AAGCGGCACT CCCAGGCTCT (2)
| 17.5 | 0.0175 |
| E15 cortex | AAGCGGCACT CCCAGGCTCT (2)
| 9.8 | 0.0098 |
| P1 cortex | AAACGGTAAG
| 13.6 | 0.0136 |
| Hypothalamus | CCCAGGCTCT (2) GATGTGTATA GTGGCCTTTG (3) TACAGGACTT (3)
| 7.2 | 0.0072 |
| E12.5 retina | AAACGGTAAG CCCAGGCTCT (2)
| 7.5 | 0.0075 |
| E14.5 retina | AAACGGTAAG CCACCTCTTG (2) CCCAGGCTCT (2) GTGGCTTGAA
| 7.2 | 0.0072 |
| E16.5 retina | CCACCTCTTG (2) CCCAGGCTCT (2)
| 7.2 | 0.0072 |
| E18.5 retina | CCACCTCTTG (2) GTGGCTTGAA
| 3.6 | 0.0036 |
| P0.5 retina | AAACGGTAAG CCCAGGCTCT (2) TACAGGACTT (3)
| 6 | 0.006 |
| P2.5 retina | AAACGGTAAG CCACCTCTTG (2) CCCAGGCTCT (2) GATGTGTATA
| 8.9 | 0.0089 |
| P4.5 retina | AAACGGTAAG
| 2 | 0.002 |
| P6.5 retina | AAACGGTAAG CCCAGGCTCT (2) GATGTGTATA GTGGCCTTTG (3)
| 10 | 0.01 |
| P10.5 crx- retina | AAACGGTAAG CCCAGGCTCT (2) GATGTGTATA
| 18.6 | 0.0186 |
| P10.5 crx+ retina | CCCAGGCTCT (2) GATGTGTATA
| 11.5 | 0.0115 |
| Adult retinal | CCCAGGCTCT (2) GATGTGTATA GTGGCCTTTG (3) TACAGGACTT (3)
| 18.7 | 0.0187 |
| ONL | GTGGCTTGAA
| 1.9 | 0.0019 |