Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.162025
Ulk2
Unc-51 like kinase 2 (C. elegans)
11
29869
Mm.162025
A830085I22Rik
RIKEN cDNA A830085I22 gene
11
320511
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 139 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ATAGCTTTCT (
8
)
93
0.093
P8 Cb GC
CAGAATGTGC
(
4
)
31
0.031
P8 Cb GC
GTTTTCATTT
(
11
)
13.1
0.0131
P8 Cb GC
AAGCCAGGAG
(
2
)
1.6
0.0016
P8 Cb GC
ATGCTGCTGA (
4
)
1.6
0.0016
P8 Cb GC
CTGGAGCTGG
(
7
)
1.6
0.0016
P8 Cb GC
GAGGTGGTGG
(
8
)
1.6
0.0016
P8 Cb GC
GCAGATCAGC
(
2
)
1.6
0.0016
P8 Cb GC
GCTCAAAAAA (
11
)
1.6
0.0016
P8 Cb GC
GGGGCTCACA (
10
)
1.6
0.0016
P8 Cb GC
TTCTCCCAAT
(
2
)
1.6
0.0016
Cb medulloblastoma
ATAGCTTTCT (
8
)
166.5
0.1665
Cb medulloblastoma
CAGAATGTGC
(
4
)
32.4
0.0324
Cb medulloblastoma
CACAACAAAA (
7
)
11.6
0.0116
Cb medulloblastoma
GCTCAAAAAA (
11
)
2.3
0.0023
Cb medulloblastoma
GTTTTCATTT
(
11
)
2.3
0.0023
P8 GC+1d culture
ATAGCTTTCT (
8
)
162.1
0.1621
P8 GC+1d culture
CAGAATGTGC
(
4
)
22.8
0.0228
P8 GC+1d culture
GCAGATCAGC
(
2
)
4.6
0.0046
P8 GC+1d culture
GTTTTCATTT
(
11
)
4.6
0.0046
P8 GC+1d culture
TTCTCCCAAT
(
2
)
3.4
0.0034
P8 GC+1d culture
AAGCCAGGAG
(
2
)
2.3
0.0023
P8 GC+1d culture
GCTCAAAAAA (
11
)
2.3
0.0023
P8 GC+1d culture
GCTCAAGTTA
(
2
)
2.3
0.0023
P8 GC+1d culture
GGGGCTCACA (
10
)
2.3
0.0023
P8 GC+1d culture
CACAACAAAA (
7
)
1.1
0.0011
P8 GC+SHH+1d culture
ATAGCTTTCT (
8
)
118.3
0.1183
P8 GC+SHH+1d culture
CAGAATGTGC
(
4
)
17.6
0.0176
P8 GC+SHH+1d culture
GTTTTCATTT
(
11
)
12.9
0.0129
P8 GC+SHH+1d culture
GCTCAAAAAA (
11
)
2.3
0.0023
P8 GC+SHH+1d culture
AAGCCAGGAG
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
CTGGAGCTGG
(
7
)
1.2
0.0012
P8 GC+SHH+1d culture
GCTCAAGTTA
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
GTTTCATTTA (
3
)
1.2
0.0012
3T3 fibroblasts
CAGAATGTGC
(
4
)
24.5
0.0245
3T3 fibroblasts
ATAGCTTTCT (
8
)
3.5
0.0035
3T3 fibroblasts
GAGGTGGTGG
(
8
)
3.5
0.0035
3T3 fibroblasts
GTTTTCATTT
(
11
)
3.5
0.0035
E15 cortex
GGGGCTCACA (
10
)
54.4
0.0544
E15 cortex
CAGAATGTGC
(
4
)
19.8
0.0198
E15 cortex
ATAGCTTTCT (
8
)
9.9
0.0099
E15 cortex
GAGGTGGTGG
(
8
)
4.9
0.0049
E15 cortex
GCAGATCAGC
(
2
)
4.9
0.0049
E15 cortex
TTCTCCCAAT
(
2
)
4.9
0.0049
P1 cortex
ATAGCTTTCT (
8
)
50
0.05
P1 cortex
CAGAATGTGC
(
4
)
13.6
0.0136
P1 cortex
GGGGCTCACA (
10
)
13.6
0.0136
P1 cortex
GCAGATCAGC
(
2
)
4.5
0.0045
P1 cortex
TTCTCCCAAT
(
2
)
4.5
0.0045
Hypothalamus
ATAGCTTTCT (
8
)
101.4
0.1014
Hypothalamus
GGGGCTCACA (
10
)
36.2
0.0362
Hypothalamus
CAGAATGTGC
(
4
)
21.7
0.0217
Hypothalamus
CACAACAAAA (
7
)
7.2
0.0072
Hypothalamus
GCAGATCAGC
(
2
)
1.8
0.0018
Hypothalamus
GCTCAAAAAA (
11
)
1.8
0.0018
E12.5 retina
GGGGCTCACA (
10
)
35.7
0.0357
E12.5 retina
CAGAATGTGC
(
4
)
18.8
0.0188
E12.5 retina
ATAGCTTTCT (
8
)
16.9
0.0169
E12.5 retina
GTTTCATTTA (
3
)
3.8
0.0038
E12.5 retina
AAACACAGAA (
3
)
1.9
0.0019
E12.5 retina
ATGCTGCTGA (
4
)
1.9
0.0019
E12.5 retina
GTTTTCATTT
(
11
)
1.9
0.0019
E14.5 retina
GGGGCTCACA (
10
)
54.7
0.0547
E14.5 retina
ATAGCTTTCT (
8
)
29.2
0.0292
E14.5 retina
CAGAATGTGC
(
4
)
10.9
0.0109
E14.5 retina
GTTTTCATTT
(
11
)
7.3
0.0073
E14.5 retina
GCTCAAAAAA (
11
)
3.6
0.0036
E14.5 retina
GTTTCATTTA (
3
)
3.6
0.0036
E14.5 retina
GCAGATCAGC
(
2
)
1.8
0.0018
E14.5 retina
GCTCAAGTTA
(
2
)
1.8
0.0018
E16.5 retina
ATAGCTTTCT (
8
)
43.5
0.0435
E16.5 retina
GGGGCTCACA (
10
)
36.2
0.0362
E16.5 retina
CAGAATGTGC
(
4
)
16.3
0.0163
E16.5 retina
GTTTTCATTT
(
11
)
7.2
0.0072
E16.5 retina
GCTGTGAAAC (
2
)
3.6
0.0036
E16.5 retina
GCTCAAAAAA (
11
)
1.8
0.0018
E16.5 retina
GCTCAAGTTA
(
2
)
1.8
0.0018
E16.5 retina
GTTTCATTTA (
3
)
1.8
0.0018
E16.5 retina
TTCTCCCAAT
(
2
)
1.8
0.0018
E18.5 retina
GGGGCTCACA (
10
)
72.8
0.0728
E18.5 retina
ATAGCTTTCT (
8
)
20
0.02
E18.5 retina
CAGAATGTGC
(
4
)
7.3
0.0073
E18.5 retina
GTTTTCATTT
(
11
)
3.6
0.0036
E18.5 retina
GCAGATCAGC
(
2
)
1.8
0.0018
E18.5 retina
GCTCAAAAAA (
11
)
1.8
0.0018
P0.5 retina
CAGAATGTGC
(
4
)
43.2
0.0432
P0.5 retina
GGGGCTCACA (
10
)
37.3
0.0373
P0.5 retina
ATAGCTTTCT (
8
)
29.4
0.0294
P0.5 retina
GTTTTCATTT
(
11
)
11.8
0.0118
P0.5 retina
GCAGATCAGC
(
2
)
2
0.002
P0.5 retina
GTTTCATTTA (
3
)
2
0.002
P2.5 retina
GGGGCTCACA (
10
)
65.1
0.0651
P2.5 retina
ATAGCTTTCT (
8
)
38.7
0.0387
P2.5 retina
GTTTTCATTT
(
11
)
15.8
0.0158
P2.5 retina
CAGAATGTGC
(
4
)
12.3
0.0123
P2.5 retina
TTCTCCCAAT
(
2
)
3.5
0.0035
P2.5 retina
GCTCAAGTTA
(
2
)
1.8
0.0018
P4.5 retina
ATAGCTTTCT (
8
)
57.5
0.0575
P4.5 retina
CAGAATGTGC
(
4
)
29.7
0.0297
P4.5 retina
GGGGCTCACA (
10
)
27.7
0.0277
P4.5 retina
GTTTTCATTT
(
11
)
9.9
0.0099
P4.5 retina
GCAGATCAGC
(
2
)
4
0.004
P4.5 retina
GCTCAAGTTA
(
2
)
2
0.002
P6.5 retina
GGGGCTCACA (
10
)
43.4
0.0434
P6.5 retina
CAGAATGTGC
(
4
)
23.3
0.0233
P6.5 retina
ATAGCTTTCT (
8
)
16.7
0.0167
P6.5 retina
GTTTTCATTT
(
11
)
11.7
0.0117
P6.5 retina
GCTCAAAAAA (
11
)
6.7
0.0067
P6.5 retina
AAACACAGAA (
3
)
3.3
0.0033
P6.5 retina
CACAACAAAA (
7
)
1.7
0.0017
P6.5 retina
CTGGAGCTGG
(
7
)
1.7
0.0017
P10.5 crx- retina
ATAGCTTTCT (
8
)
44.6
0.0446
P10.5 crx- retina
CAGAATGTGC
(
4
)
31.6
0.0316
P10.5 crx- retina
GTTTTCATTT
(
11
)
27.9
0.0279
P10.5 crx- retina
GGGGCTCACA (
10
)
24.2
0.0242
P10.5 crx- retina
GCTGTGAAAC (
2
)
3.7
0.0037
P10.5 crx- retina
TTCTCCCAAT
(
2
)
3.7
0.0037
P10.5 crx+ retina
ATAGCTTTCT (
8
)
40.4
0.0404
P10.5 crx+ retina
CAGAATGTGC
(
4
)
25
0.025
P10.5 crx+ retina
GGGGCTCACA (
10
)
17.3
0.0173
P10.5 crx+ retina
GTTTTCATTT
(
11
)
5.8
0.0058
P10.5 crx+ retina
GCAGATCAGC
(
2
)
3.8
0.0038
P10.5 crx+ retina
GCTCAAGTTA
(
2
)
3.8
0.0038
P10.5 crx+ retina
GCTGTGAAAC (
2
)
1.9
0.0019
Adult retinal
GGGGCTCACA (
10
)
31.5
0.0315
Adult retinal
ATAGCTTTCT (
8
)
16.7
0.0167
Adult retinal
CAGAATGTGC
(
4
)
16.7
0.0167
Adult retinal
GTTTTCATTT
(
11
)
11.1
0.0111
Adult retinal
CACAACAAAA (
7
)
3.7
0.0037
Adult retinal
CTGGAGCTGG
(
7
)
1.9
0.0019
Adult retinal
GCTCAAAAAA (
11
)
1.9
0.0019
Adult retinal
TTCTCCCAAT
(
2
)
1.9
0.0019
ONL
GGGGCTCACA (
10
)
38.3
0.0383
ONL
CAGAATGTGC
(
4
)
11.5
0.0115
ONL
ATAGCTTTCT (
8
)
9.6
0.0096
ONL
GCTGTCCTCT (
3
)
5.7
0.0057
ONL
GTTTTCATTT
(
11
)
5.7
0.0057
ONL
ATGCTGCTGA (
4
)
3.8
0.0038
ONL
GCTCAAAAAA (
11
)
1.9
0.0019
