Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.16228	Slc25a4	solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 4	8	8 26.0 cM	11739
Gene Ontology	binding | inner membrane | integral to membrane | membrane | mitochondrial inner membrane | mitochondrial transport | mitochondrion | transport | transporter activity
Human Homolog	SLC25A4[solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 150 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGTGGTGCTT 34.3 0.0343 P8 Cb GC GCCTCTGGTG (11) 24.5 0.0245 P8 Cb GC CCAGAAAAAA (8) 4.9 0.0049 P8 Cb GC ATGAAAAAAA (14) 3.3 0.0033 P8 Cb GC GGCTGGGGCG (2) 3.3 0.0033 P8 Cb GC GGGCTGGGGA (7) 3.3 0.0033 P8 Cb GC GGTGGTGCCT (7) 3.3 0.0033 P8 Cb GC CCAGCAAACA (3) 1.6 0.0016 P8 Cb GC CCAGGAAACA (3) 1.6 0.0016 P8 Cb GC GCTGCTGGGG (6) 1.6 0.0016 Cb medulloblastoma GGTGGTGCTT 76.3 0.0763 Cb medulloblastoma GCCTCTGGTG (11) 16.2 0.0162 Cb medulloblastoma ATGAAAAAAA (14) 11.6 0.0116 Cb medulloblastoma CCTCTCAGTA (2) 4.6 0.0046 Cb medulloblastoma CCAGAAAAAA (8) 2.3 0.0023 Cb medulloblastoma GGCTGGGGCG (2) 2.3 0.0023 Cb medulloblastoma GGTGGTGCCT (7) 2.3 0.0023 P8 GC+1d culture GGTGGTGCTT 51.4 0.0514 P8 GC+1d culture GCCTCTGGTG (11) 22.8 0.0228 P8 GC+1d culture GGCTGGGGCG (2) 8 0.008 P8 GC+1d culture ATGAAAAAAA (14) 5.7 0.0057 P8 GC+1d culture GGTGGTGCCT (7) 3.4 0.0034 P8 GC+1d culture CCAGAAAAAA (8) 2.3 0.0023 P8 GC+SHH+1d culture GGTGGTGCTT 36.3 0.0363 P8 GC+SHH+1d culture GCCTCTGGTG (11) 26.9 0.0269 P8 GC+SHH+1d culture ATGAAAAAAA (14) 3.5 0.0035 P8 GC+SHH+1d culture GGCTGGGGCG (2) 3.5 0.0035 P8 GC+SHH+1d culture GGTGGTGCCT (7) 3.5 0.0035 P8 GC+SHH+1d culture CCAGAAAAAA (8) 1.2 0.0012 P8 GC+SHH+1d culture GGTGGGGCTT (3) 1.2 0.0012 P8 GC+SHH+1d culture GGTGTGGGGG (9) 1.2 0.0012 3T3 fibroblasts GGTGGTGCTT 59.6 0.0596 3T3 fibroblasts GCCTCTGGTG (11) 31.5 0.0315 3T3 fibroblasts GGTGGTGCCT (7) 10.5 0.0105 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts CCTCTCAGTA (2) 7 0.007 3T3 fibroblasts GGCTGGGGCG (2) 3.5 0.0035 E15 cortex GGTGGTGCTT 44.5 0.0445 E15 cortex GGCTGGGGCG (2) 9.9 0.0099 E15 cortex CCAGAAAAAA (8) 4.9 0.0049 E15 cortex CCAGGAAACA (3) 4.9 0.0049 E15 cortex GGTGGGGCTT (3) 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex GGTGGTGCTT 36.4 0.0364 P1 cortex CCAGAAAAAA (8) 4.5 0.0045 P1 cortex CCTCTCAGTA (2) 4.5 0.0045 P1 cortex GCCTCTGGTG (11) 4.5 0.0045 P1 cortex GGGCTGGGGA (7) 4.5 0.0045 P1 cortex GGTGGCGCTT (3) 4.5 0.0045 Hypothalamus GGTGGTGCTT 38 0.038 Hypothalamus GCCTCTGGTG (11) 16.3 0.0163 Hypothalamus GGTGGTGCCT (7) 7.2 0.0072 Hypothalamus ATGAAAAAAA (14) 1.8 0.0018 Hypothalamus CCAGCAAACA (3) 1.8 0.0018 Hypothalamus CCTCTCAGTA (2) 1.8 0.0018 Hypothalamus GGCTGGGGCG (2) 1.8 0.0018 Hypothalamus GGGCTGGGGA (7) 1.8 0.0018 E12.5 retina GCCTCTGGTG (11) 56.3 0.0563 E12.5 retina GGTGGTGCTT 24.4 0.0244 E12.5 retina GGTGGTGCCT (7) 9.4 0.0094 E12.5 retina GGCTGGGGCG (2) 5.6 0.0056 E12.5 retina ATGAAAAAAA (14) 1.9 0.0019 E12.5 retina GCTGCTGGGG (6) 1.9 0.0019 E12.5 retina GGTGTGGGGG (9) 1.9 0.0019 E14.5 retina GCCTCTGGTG (11) 23.7 0.0237 E14.5 retina GGTGGTGCTT 9.1 0.0091 E14.5 retina GGGCTGGGGA (7) 5.5 0.0055 E14.5 retina GGTGGTGCCT (7) 5.5 0.0055 E14.5 retina ATGAAAAAAA (14) 3.6 0.0036 E14.5 retina CCAGAAAAAA (8) 1.8 0.0018 E14.5 retina CCTCTCAGTA (2) 1.8 0.0018 E16.5 retina GCCTCTGGTG (11) 39.8 0.0398 E16.5 retina GGTGGTGCTT 21.7 0.0217 E16.5 retina ATGAAAAAAA (14) 3.6 0.0036 E16.5 retina GGGCTGGGGA (7) 3.6 0.0036 E16.5 retina GGTGGTGCCT (7) 3.6 0.0036 E18.5 retina GCCTCTGGTG (11) 52.8 0.0528 E18.5 retina GGGCTGGGGA (7) 16.4 0.0164 E18.5 retina GGTGGTGCTT 12.7 0.0127 E18.5 retina ATGAAAAAAA (14) 5.5 0.0055 E18.5 retina CCAGAAAAAA (8) 3.6 0.0036 E18.5 retina CCTCTCAGTA (2) 3.6 0.0036 E18.5 retina GGCTGGGGCG (2) 1.8 0.0018 E18.5 retina GGTGGTGCCT (7) 1.8 0.0018 P0.5 retina GCCTCTGGTG (11) 45.1 0.0451 P0.5 retina GGTGGTGCTT 29.4 0.0294 P0.5 retina GGCTGGGGCG (2) 7.9 0.0079 P0.5 retina ATGAAAAAAA (14) 3.9 0.0039 P0.5 retina GCTGCTGGGG (6) 3.9 0.0039 P0.5 retina GGTGATGCTT (2) 3.9 0.0039 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina CCTCTCAGTA (2) 2 0.002 P2.5 retina GCCTCTGGTG (11) 45.8 0.0458 P2.5 retina GGTGGTGCTT 12.3 0.0123 P2.5 retina ATGAAAAAAA (14) 3.5 0.0035 P2.5 retina CCAGAAAAAA (8) 1.8 0.0018 P2.5 retina CCAGGAAACA (3) 1.8 0.0018 P2.5 retina GCTGCTGGGG (6) 1.8 0.0018 P2.5 retina GGGCTGGGGA (7) 1.8 0.0018 P2.5 retina GGTGGTGCCT (7) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P4.5 retina GCCTCTGGTG (11) 31.7 0.0317 P4.5 retina GGTGGTGCTT 15.9 0.0159 P4.5 retina ATGAAAAAAA (14) 4 0.004 P4.5 retina GGTGTGGGGG (9) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P6.5 retina GGTGGTGCTT 45 0.045 P6.5 retina GCCTCTGGTG (11) 26.7 0.0267 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina ATGAAAAAAA (14) 1.7 0.0017 P6.5 retina CCAGAAAAAA (8) 1.7 0.0017 P6.5 retina CCTCTCAGTA (2) 1.7 0.0017 P6.5 retina GCAGCAAACA (6) 1.7 0.0017 P6.5 retina GCTGCTGGGG (6) 1.7 0.0017 P6.5 retina GGCTGGGGCG (2) 1.7 0.0017 P6.5 retina GGTGGTGCCT (7) 1.7 0.0017 P6.5 retina GTGGTGCTTT 1.7 0.0017 P10.5 crx- retina GGTGGTGCTT 159.8 0.1598 P10.5 crx- retina GCCTCTGGTG (11) 18.6 0.0186 P10.5 crx- retina CCTCTCAGTA (2) 11.1 0.0111 P10.5 crx- retina GGCTGGGGCG (2) 3.7 0.0037 P10.5 crx- retina GGTGGTGCCT (7) 3.7 0.0037 P10.5 crx- retina ATGAAAAAAA (14) 1.9 0.0019 P10.5 crx- retina CCAGAAAAAA (8) 1.9 0.0019 P10.5 crx- retina CCAGCAAACA (3) 1.9 0.0019 P10.5 crx+ retina GGTGGTGCTT 55.8 0.0558 P10.5 crx+ retina GCCTCTGGTG (11) 30.8 0.0308 P10.5 crx+ retina ATGAAAAAAA (14) 1.9 0.0019 P10.5 crx+ retina CCAGAAAAAA (8) 1.9 0.0019 P10.5 crx+ retina CCAGCAAACA (3) 1.9 0.0019 P10.5 crx+ retina CCTCTCAGTA (2) 1.9 0.0019 P10.5 crx+ retina GGTGTGGGGG (9) 1.9 0.0019 P10.5 crx+ retina GTGGTGCTTT 1.9 0.0019 Adult retinal GGTGGTGCTT 83.3 0.0833 Adult retinal GCCTCTGGTG (11) 24.1 0.0241 Adult retinal GCTGCTGGGG (6) 11.1 0.0111 Adult retinal GCAGCAAACA (6) 3.7 0.0037 Adult retinal GGCTGGGGCG (2) 3.7 0.0037 Adult retinal CCAGAAAAAA (8) 1.9 0.0019 Adult retinal CCTCTCAGTA (2) 1.9 0.0019 Adult retinal GGTGGCGCTT (3) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 Adult retinal GTGGTGCTTT 1.9 0.0019 ONL GGGCTGGGGA (7) 23 0.023 ONL GGTGGTGCTT 23 0.023 ONL GCCTCTGGTG (11) 13.4 0.0134 ONL GGTGGTGCCT (7) 5.7 0.0057 ONL GTCATAGCTG (590) 5.7 0.0057 ONL GCTGCTGGGG (6) 1.9 0.0019 ONL GGCTGGGGCG (2) 1.9 0.0019