| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAGTCAGGA (4) TTATAGGTGG (4)
| 3.2 | 0.0032 |
| Cb medulloblastoma | CAAATTTATT (5) TTAGTGCAGG (4)
| 4.6 | 0.0046 |
| P8 GC+1d culture | AAAGTCAGGA (4) CAAATTTATT (5) TTATAGGTGG (4)
| 4.5 | 0.0045 |
| P8 GC+SHH+1d culture | CAAATTTATT (5) TCAGATGGAA (4) TTAGTGCAGG (4)
| 5.8 | 0.0058 |
| 3T3 fibroblasts | TTAGTGCAGG (4) TTATAGGTGG (4)
| 7 | 0.007 |
| P1 cortex | AAAGTCAGGA (4) TTAGTGCAGG (4)
| 9 | 0.009 |
| Hypothalamus | TTATAGGTGG (4)
| 1.8 | 0.0018 |
| E12.5 retina | AAAGTCAGGA (4)
| 1.9 | 0.0019 |
| E14.5 retina | TCAGATGGAA (4)
| 1.8 | 0.0018 |
| E16.5 retina | AAAGTCAGGA (4) TTAGTGCAGG (4)
| 3.6 | 0.0036 |
| P0.5 retina | TTAGTGCAGG (4)
| 5.9 | 0.0059 |
| P2.5 retina | AAAGTCAGGA (4) TTATAGGTGG (4)
| 7 | 0.007 |
| P4.5 retina | AATAATACAT (4) TTGGGTTTGC (5)
| 6 | 0.006 |
| P6.5 retina | TTAGTGCAGG (4)
| 1.7 | 0.0017 |
| P10.5 crx- retina | AAAGTCAGGA (4) TTAGTGCAGG (4) TTATAGGTGG (4)
| 5.7 | 0.0057 |
| P10.5 crx+ retina | CAAATTTATT (5) TTAGTGCAGG (4) TTGGGTTTGC (5)
| 5.7 | 0.0057 |
| Adult retinal | AATAATACAT (4) CAAATTTATT (5) TTAGTGCAGG (4)
| 7.5 | 0.0075 |
| ONL | AATAATACAT (4) CAAATTTATT (5) TTAGTGCAGG (4) TTATAGGTGG (4)
| 9.5 | 0.0095 |